Adding Release Tag

[ben-heil]

Hi, I'm trying to install PLIER in an Anaconda environment using the conda skeleton cran command. Unfortunately, doing so fails unless there is at least one release for the repo. Would it be possible to add a release to make the repo compatible with conda?

[wgmao]

Thanks for your feedback. We have created the release of PLIER package. Let me know if the installation meets any problem.

[ben-heil]

That fixed the tag issue, thanks! Now it's throwing a dependency error because qvalue is a bioconductor package instead of a CRAN package. I ran into this problem trying to install the package with devtools as well. I looked up the issue and found that adding a biocViews field to the DESCRIPTION file gets devtools to search for dependencies in Bioconductor as well as CRAN.

[wgmao]

Great trick! I have compiled a new release v0.1.1 and it should resolve the problem now.

[ben-heil]

Awesome, thank you!

[msubirana]

Hi! Can you explain how I can implement this to install PLIER to my conda env as well? Thanks in advance!

[wgmao]

Hi! Can you explain how I can implement this to install PLIER to my conda env as well? Thanks in advance!

If you have installed R in your conda environment, you can install PLIER in the R command window (after starting the corresponding conda R) via remotes::install_github("wgmao/PLIER").