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mapreduce.ts
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mapreduce.ts
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import { writeJSON } from '@wholebuzz/fs/lib/json'
import { openNullWritable } from '@wholebuzz/fs/lib/stream'
import { Shard, shardedFilename, waitForCompleteShardedInput } from '@wholebuzz/fs/lib/util'
import { assignDatabaseCopyOutputProperties, DatabaseCopyOptions, dbcp } from 'dbcp'
import { DatabaseCopyShardFunction, inputIsSqlDatabase } from 'dbcp/dist/format'
import { updateObjectProperties } from 'dbcp/dist/util'
import { runMapPhaseWithLevelDb } from './leveldb'
import { factoryConstruct, getObjectClassName } from './plugins'
import {
defaultDiretory,
defaultKeyProperty,
defaultShuffleFormat,
getUser,
getWorkDirectory,
immutableContext,
inputshardFilenameFormat,
localTempDirectoryPrefix,
mapTransform,
newJobId,
reduceTransform,
shuffleFilenameFormat,
synchronizeMapFilenameFormat,
synchronizeReduceFilenameFormat,
} from './runtime'
import { getSplits } from './splits'
import { InputSplit, Mapper, MapperImplementation, MapReduceRuntimeConfig, Reducer } from './types'
export async function mapReduce<Key, Value>(args: MapReduceRuntimeConfig<Key, Value>) {
const keyProperty = args.configuration?.keyProperty || defaultKeyProperty
const shuffleFormat = defaultShuffleFormat
const user = getUser(args.configuration?.user)
const jobid = args.jobid || newJobId(args.configuration?.name)
const subdir = getWorkDirectory(user, jobid)
const localDirectory = (args.localDirectory ?? defaultDiretory) + subdir
const shuffleDirectory = (args.shuffleDirectory ?? defaultDiretory) + subdir
const outputShards = args.outputShards || 1
const isNullOutput = args.outputPath === '/dev/null'
const runMapPhase = getMapperImplementation(args.mapperImplementation, !!args.combinerClass)
// Validate input
if (!localDirectory.endsWith('/')) throw new Error('localDirectory should end with slash')
if (!shuffleDirectory.endsWith('/')) throw new Error('shuffleDirectory should end with slash')
if (isNullOutput) {
if (outputShards !== 1) throw new Error(`null output with outputShards ${outputShards}`)
if (!args.unpatchMap && !args.unpatchReduce) {
throw new Error(`null output without unpatchMap or unpatchReduce`)
}
}
if (args.logger) {
args.logger.info(`mapReduce configuration ${JSON.stringify(args.configuration ?? {})}`)
if ((args.inputShardFilter || args.outputShardFilter) && !args.shuffleDirectory) {
args.logger.info(`WARNING: no shuffleDirectory specified`)
}
}
// Since local files show partial writes they need extra synchronization
const isCloudStorageUrl =
shuffleDirectory.startsWith('s3://') || shuffleDirectory.startsWith('gs://')
if (args.synchronizeMap === undefined && !isCloudStorageUrl) {
args.synchronizeMap = true
}
if (args.synchronizeReduce === undefined && !isCloudStorageUrl) {
args.synchronizeReduce = true
}
// Find input splits
if (!args.inputSplits) {
args.inputSplits = inputIsSqlDatabase(args.inputType)
? new Array(args.inputShards || 1).fill({ url: '' })
: await getSplits(args.fileSystem, args.inputPaths, args.inputSplitSize)
}
await args.fileSystem.ensureDirectory(shuffleDirectory)
if (args.unpatchMap && args.logger) {
args.logger.info(`Unpatching Mapper with inputSplits=${JSON.stringify(args.inputSplits)}`)
}
// map phase
const runMap = args.runMap !== false && !args.unpatchMap
for (let inputSplit = 0; runMap && inputSplit < args.inputSplits.length; inputSplit++) {
if (args.inputShardFilter && !args.inputShardFilter(inputSplit)) continue
const shard = { index: inputSplit, modulus: args.inputSplits.length }
const inputshard = shardedFilename(inputshardFilenameFormat, shard)
const currentSplit = args.inputSplits[inputSplit]
const localDirectories = new Array(outputShards)
.fill(localDirectory)
.map((x, i) => x + `${localTempDirectoryPrefix}-input${inputSplit}-output${i}/`)
const options: DatabaseCopyOptions = {
...assignDatabaseCopyOutputProperties(args, undefined),
shardBy: keyProperty,
inputFiles: inputIsSqlDatabase(args.inputType)
? undefined
: [
{
url: currentSplit.url,
fileOptions: currentSplit.parquetRowGroupRange
? {
rowGroupRange: currentSplit.parquetRowGroupRange,
}
: currentSplit.byteOffsetRange
? {
byteOffset: currentSplit.byteOffsetRange[0],
byteLength: currentSplit.byteOffsetRange[1] - currentSplit.byteOffsetRange[0],
}
: undefined,
},
],
inputShardIndex: inputSplit,
orderBy: args.inputShardBy ? [args.inputShardBy] : undefined,
// dir/shuffle-SSSS-of-NNNN.inputshard-0000-of-0004.jsonl.gz
outputFile: isNullOutput
? undefined
: (args.unpatchReduce ? args.outputPath : shuffleDirectory + `${shuffleFilenameFormat}`) +
`.${inputshard}.${shuffleFormat}`,
outputShards,
outputStream: isNullOutput ? [openNullWritable()] : undefined,
tempDirectories: localDirectories,
}
if (!args.mapperClass) throw new Error('No mapper')
const mapper = factoryConstruct(args.mapperClass)
if (mapper.configure) mapper.configure(args)
if (mapper.setup) {
await mapper.setup(immutableContext(args.configuration))
}
const combiner = args.combinerClass ? factoryConstruct(args.combinerClass) : undefined
if (combiner?.configure) combiner.configure(args)
if (combiner?.setup) {
await combiner?.setup(immutableContext(args.configuration))
}
for (const directory of localDirectories) await args.fileSystem.ensureDirectory(directory)
await runMapPhase(mapper, combiner, args, options)
for (const directory of localDirectories) {
await args.fileSystem.removeDirectory(directory, { recursive: true })
}
if (combiner?.cleanup) {
await combiner.cleanup(immutableContext(args.configuration))
}
if (mapper.cleanup) {
await mapper.cleanup(immutableContext(args.configuration))
}
if (args.synchronizeMap) {
const filename = shardedFilename(shuffleDirectory + synchronizeMapFilenameFormat, shard)
await writeJSON(args.fileSystem, filename, {
success: true,
})
args.logger?.info(`Synchronize Mapper wrote ${filename}`)
}
}
// reduce phase
const runReduce = args.runReduce !== false && !args.unpatchReduce
for (let outputShard = 0; runReduce && outputShard < outputShards; outputShard++) {
if (args.outputShardFilter && !args.outputShardFilter(outputShard)) continue
const shard = { index: outputShard, modulus: outputShards }
const options = {
...assignDatabaseCopyOutputProperties({}, args),
orderBy: [keyProperty],
inputFiles: args.unpatchMap
? getMatchingInputSplits(args.inputSplits, shard).map((x) => ({
url: x.url,
}))
: [
{
url:
shuffleDirectory +
shardedFilename(shuffleFilenameFormat, shard) +
`.${inputshardFilenameFormat}.${shuffleFormat}`,
inputShards: args.inputSplits.length,
},
],
outputFile: shardedFilename(args.outputPath, shard),
}
if (!args.unpatchMap) {
const waitForUrl = args.synchronizeMap
? shuffleDirectory + synchronizeMapFilenameFormat
: options.inputFiles[0].url
args.logger?.debug(`Wait for ${waitForUrl}@${args.inputSplits.map((x) => x.url)}`)
await waitForCompleteShardedInput(args.fileSystem, waitForUrl, {
shards: args.inputSplits.length,
})
args.logger?.debug(`Found ${waitForUrl}`)
}
if (!args.reducerClass) throw new Error('No reducer')
const reducer = factoryConstruct(args.reducerClass)
if (reducer.configure) reducer.configure(args)
if (reducer.setup) {
await reducer.setup(immutableContext(args.configuration))
}
await runReducePhase(reducer, args, options)
if (reducer.cleanup) {
await reducer.cleanup(immutableContext(args.configuration))
}
if (args.synchronizeReduce) {
const filename = shardedFilename(shuffleDirectory + synchronizeReduceFilenameFormat, shard)
await writeJSON(args.fileSystem, filename, {
success: true,
})
args.logger?.info(`Synchronize Reducer wrote ${filename}`)
}
}
// cleanup phase
if (args.cleanup !== false) {
await runCleanupPhase(
{
inputShards: args.inputSplits.length,
outputShards,
runMap,
runReduce,
shuffleDirectory,
shuffleFormat,
},
args
)
}
}
export function getMapperImplementation(type?: MapperImplementation, hasCombiner?: boolean) {
switch (type) {
case MapperImplementation.externalSorting:
return runMapPhaseWithExternalSorting
case MapperImplementation.leveldb:
return runMapPhaseWithLevelDb
default:
return hasCombiner ? runMapPhaseWithLevelDb : runMapPhaseWithExternalSorting
}
}
export function getMatchingInputSplits(inputSplits: InputSplit[], outputShard: Shard) {
return inputSplits.filter((inputSplit) => {
if (!inputSplit.numShards || inputSplit.shardIndex === undefined) return true
if (outputShard.modulus === inputSplit.numShards) {
return inputSplit.shardIndex === outputShard.index
}
if (
inputSplit.numShards % outputShard.modulus !== 0 &&
outputShard.modulus % inputSplit.numShards !== 0
) {
throw new Error(
`Can't match ${JSON.stringify(inputSplit)} with ${JSON.stringify(outputShard)}}`
)
}
if (inputSplit.numShards < outputShard.modulus) {
const N = outputShard.modulus / inputSplit.numShards
for (let i = 0; i < N; i++) {
if (outputShard.index === inputSplit.shardIndex + i * inputSplit.numShards) return true
}
} else {
const N = inputSplit.numShards / outputShard.modulus
for (let i = 0; i < N; i++) {
if (inputSplit.shardIndex === outputShard.index + i * outputShard.modulus) return true
}
}
return false
})
}
export async function runReducePhase<Key, Value>(
reducer: Reducer<Key, Value>,
args: MapReduceRuntimeConfig<Key, Value>,
options: DatabaseCopyOptions
) {
options = {
...options,
group: true,
groupLabels: true,
outputShards: undefined,
}
if (args.logger) {
args.logger.info(
`runReducePhase ${getObjectClassName(reducer) || 'reduce'} ${JSON.stringify({
...options,
fileSystem: {},
})}`
)
}
await dbcp({
...options,
fileSystem: args.fileSystem,
transformObjectStream: () =>
reduceTransform(reducer, { configuration: args.configuration, logger: args.logger }),
})
}
export async function runMapPhaseWithExternalSorting<Key, Value>(
mapper: Mapper<Key, Value>,
combiner: Reducer<Key, Value> | undefined,
args: MapReduceRuntimeConfig<Key, Value>,
options: DatabaseCopyOptions
) {
const keyProperty = options.shardBy!
const dontSort =
args.unpatchReduce &&
(args.outputShardFunction === DatabaseCopyShardFunction.random ||
args.outputShardFunction === DatabaseCopyShardFunction.roundrobin)
options = {
...options,
externalSortBy: dontSort ? undefined : [keyProperty],
}
if (combiner) {
throw new Error(`MapperImplementation.externalSorting doesn't support combiners`)
}
if (args.logger) {
args.logger.info(
`runMapPhaseWithExternalSorting ${getObjectClassName(mapper) || 'map'} ${JSON.stringify({
...options,
fileSystem: {},
})}`
)
}
await dbcp({
...options,
fileSystem: args.fileSystem,
inputFiles: updateObjectProperties(options.inputFiles, (x) => ({
...x,
transformInputObjectStream: () =>
mapTransform(mapper, {
configuration: args.configuration,
logger: args.logger,
}),
})),
})
}
export async function runCleanupPhase<Key, Value>(
args: {
inputShards: number
outputShards: number
runMap: boolean
runReduce: boolean
shuffleDirectory: string
shuffleFormat: string
},
options: MapReduceRuntimeConfig<Key, Value>
) {
if (!options.unpatchMap && !options.unpatchReduce) {
for (let outputShard = 0; outputShard < args.outputShards; outputShard++) {
if (options.outputShardFilter && !options.outputShardFilter(outputShard)) continue
const shard = { index: outputShard, modulus: args.outputShards }
for (let inputShard = 0; inputShard < args.inputShards; inputShard++) {
await options.fileSystem.removeFile(
args.shuffleDirectory +
shardedFilename(shuffleFilenameFormat, shard) +
'.' +
shardedFilename(inputshardFilenameFormat, {
index: inputShard,
modulus: args.inputShards,
}) +
`.${args.shuffleFormat}`
)
}
}
}
if (!options.outputShardFilter || options.outputShardFilter(0)) {
if (args.runReduce && options.synchronizeReduce) {
await waitForCompleteShardedInput(
options.fileSystem,
args.shuffleDirectory + synchronizeReduceFilenameFormat,
{
shards: args.outputShards,
}
)
} else if (options.unpatchReduce && args.runMap && options.synchronizeMap) {
await waitForCompleteShardedInput(
options.fileSystem,
args.shuffleDirectory + synchronizeMapFilenameFormat,
{
shards: args.inputShards,
}
)
}
if (args.runMap && options.synchronizeMap) {
for (let inputShard = 0; inputShard < args.inputShards; inputShard++) {
const shard = { index: inputShard, modulus: args.inputShards }
await options.fileSystem.removeFile(
shardedFilename(args.shuffleDirectory + synchronizeMapFilenameFormat, shard)
)
}
}
if (args.runReduce && options.synchronizeReduce) {
for (let outputShard = 0; outputShard < args.outputShards; outputShard++) {
const shard = { index: outputShard, modulus: args.outputShards }
await options.fileSystem.removeFile(
shardedFilename(args.shuffleDirectory + synchronizeReduceFilenameFormat, shard)
)
}
}
}
}