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DESCRIPTION
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DESCRIPTION
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Package: seismicGWAS
Title: Single-cell Expression Investigation for Study of Molecular Interactions and Connections
Version: 0.98.1
Authors@R: c(
person("Qiliang", "Lai", , "ql29@rice.edu", role = c("aut", "cre")),
person("Ruth", "Dannenfelser", email="rtdn@rice.edu", role = c("aut"),
comment = c(ORCID = "0000-0002-8766-6424")),
person("Vicky", "Yao", email="vy@rice.edu", role = c("aut"),
comment = c(ORCID = "0000-0002-3201-9983")))
Description: Discover cell type-disease associations using single-cell RNA-seq and GWAS summary statistics.
License: BSD_3_clause + file LICENSE
Depends:
R (>= 4.0.0)
Imports:
data.table,
ggplot2,
ggrepel,
magrittr,
Matrix,
SingleCellExperiment,
speedglm,
SummarizedExperiment
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
URL: https://github.com/ylaboratory/seismic
BugReports: https://github.com/ylaboratory/seismic/issues
biocViews: Annotation, Genetics, GenomeWideAssociation, SingleCell, Software, Transcriptomics
LazyData: true
LazyDataCompression: xz
Suggests:
knitr,
rmarkdown
VignetteBuilder: knitr