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5h0s_validation.xml
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5h0s_validation.xml
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<?xml version="1.0" encoding="UTF-8"?>
<wwPDB-validation-information xmlns:VRPTx="http://pdbml.pdb.org/schema/pdbx-validation-v4.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="http://wwpdb.org/validation/schema/wwpdb_validation_v6.01.xsd">
<Entry pdbid="5H0S" XMLcreationDate="2018-02-16" PDB-deposition-date="2016-10-06" PDB-revision-number="1" PDB-revision-date="2017-01-25" PDB-resolution="3.3" EMDB-resolution="3.3" PDB-resolution-low="NotAvailable" PDB-R="NotAvailable" PDB-Rfree="NotAvailable" protein-DNA-RNA-entities="1" angles_rmsz="1.34" bonds_rmsz="1.39" num_angles_rmsz="26235" num_bonds_rmsz="19272" clashscore="65.45" percent-rama-outliers="4.59" percent-rota-outliers="17.30" percentilebins="all,em" absolute-percentile-clashscore="8.7" numPDBids-absolute-percentile-clashscore="1886" absolute-percentile-percent-rama-outliers="17.1" numPDBids-absolute-percentile-percent-rama-outliers="1663" absolute-percentile-percent-rota-outliers="6.5" numPDBids-absolute-percentile-percent-rota-outliers="1531" attemptedValidationSteps="validation-pipeline,mogul,validation-pack,molprobity,percentiles"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="THR" seq="134" resnum="134" icode="" altcode="" rota="p"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LYS" seq="135" resnum="135" icode="" altcode="" phi="-95.4" psi="141.4" rama="Favored" rota="pttp">
<clash cid="1" atom="HD3" dist="1.59" clashmag="1.01"/>
<clash cid="2" atom="HE2" dist="1.30" clashmag="1.22"/>
<clash cid="3" atom="HE2" dist="1.61" clashmag="0.81"/>
<clash cid="4" atom="HE2" dist="2.14" clashmag="0.63"/>
<clash cid="5" atom="HE2" dist="2.30" clashmag="0.61"/>
<clash cid="6" atom="CD" dist="1.97" clashmag="1.11"/>
<clash cid="7" atom="HE3" dist="1.06" clashmag="1.08"/>
<clash cid="8" atom="HE3" dist="1.76" clashmag="1.00"/>
<clash cid="9" atom="CE" dist="1.77" clashmag="1.32"/>
<clash cid="10" atom="CE" dist="2.28" clashmag="0.63"/>
<clash cid="11" atom="CE" dist="2.93" clashmag="0.44"/>
<clash cid="12" atom="CE" dist="2.65" clashmag="0.42"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="136" resnum="136" icode="" altcode="" phi="-86.5" psi="147.3" rama="Favored" rota="t"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="137" resnum="137" icode="" altcode="" phi="-69.7" psi="124.3" rama="Favored" rota="mm"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="138" resnum="138" icode="" altcode="" phi="-136.4" psi="119.5" rama="Favored" rota="t80"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASN" seq="139" resnum="139" icode="" altcode="" phi="-82.0" psi="-5.4" rama="Favored" flippable-sidechain="1" rota="m120">
<clash cid="13" atom="O" dist="1.88" clashmag="0.74"/>
<clash cid="14" atom="O" dist="2.10" clashmag="0.69"/>
<clash cid="15" atom="O" dist="2.56" clashmag="0.53"/>
<clash cid="16" atom="O" dist="2.63" clashmag="0.47"/>
<clash cid="17" atom="O" dist="2.20" clashmag="0.42"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLY" seq="140" resnum="140" icode="" altcode="" phi="-105.3" psi="-174.8" rama="Favored"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="141" resnum="141" icode="" altcode="" phi="-93.0" psi="124.3" rama="Favored" rota="tp">
<clash cid="18" atom="HD21" dist="2.02" clashmag="0.41"/>
<clash cid="19" atom="HD11" dist="1.87" clashmag="0.57"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="142" resnum="142" icode="" altcode="" phi="-107.0" psi="108.1" rama="Favored" rota="t70"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="143" resnum="143" icode="" altcode="" phi="-101.3" psi="122.4" rama="Favored" rota="m"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASN" seq="144" resnum="144" icode="" altcode="" phi="-101.0" psi="-1.3" rama="Favored" rota="p-10">
<clash cid="20" atom="H" dist="1.58" clashmag="0.52"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="THR" seq="145" resnum="145" icode="" altcode="" phi="-138.6" psi="152.2" rama="Favored" rota="m">
<clash cid="21" atom="HB" dist="1.83" clashmag="0.60"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLU" seq="146" resnum="146" icode="" altcode="" phi="-128.9" psi="112.7" rama="Favored" rota="mt-10"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="147" resnum="147" icode="" altcode="" phi="-89.4" psi="125.3" rama="Favored" rota="p">
<clash cid="22" atom="HG13" dist="1.99" clashmag="0.45"/>
<clash cid="23" atom="HB" dist="1.78" clashmag="0.66"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLN" seq="148" resnum="148" icode="" altcode="" phi="-75.2" psi="174.1" rama="Favored" flippable-sidechain="1" rota="pt20">
<clash cid="24" atom="HB2" dist="1.96" clashmag="0.47"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PRO" seq="149" resnum="149" icode="" altcode="" phi="-77.4" psi="92.3" rama="Allowed" rota="Cg_endo">
<clash cid="24" atom="HD2" dist="1.96" clashmag="0.47"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="150" resnum="150" icode="" altcode="" phi="-80.0" psi="91.6" rama="Favored" rota="pp">
<clash cid="25" atom="O" dist="2.12" clashmag="0.48"/>
<clash cid="25" atom="HD12" dist="2.12" clashmag="0.48"/>
<clash cid="26" atom="HD21" dist="1.93" clashmag="0.51"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="SER" seq="151" resnum="151" icode="" altcode="" phi="165.2" psi="159.4" rama="OUTLIER" rota="m"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="152" resnum="152" icode="" altcode="" phi="-136.3" psi="112.8" rama="Favored" rota="m-20"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="153" resnum="153" icode="" altcode="" phi="-124.1" psi="-78.5" rama="Allowed" rota="m-20">
<clash cid="27" atom="OD2" dist="2.19" clashmag="0.42"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="154" resnum="154" icode="" altcode="" phi="-83.5" psi="176.8" rama="Favored" rota="m-85">
<clash cid="28" atom="CG" dist="2.50" clashmag="0.47"/>
<clash cid="29" atom="HA" dist="2.15" clashmag="0.47"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LYS" seq="155" resnum="155" icode="" altcode="" phi="-141.2" psi="152.3" rama="Favored" rota="pttp"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLN" seq="156" resnum="156" icode="" altcode="" phi="-103.5" psi="108.8" rama="Favored" rota="mp0">
<clash cid="30" atom="HG2" dist="1.96" clashmag="0.47"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="157" resnum="157" icode="" altcode="" phi="-84.8" psi="-42.0" rama="Favored" rota="pt">
<clash cid="31" atom="HG12" dist="2.21" clashmag="0.41"/>
<clash cid="32" atom="HD13" dist="1.98" clashmag="0.44"/>
<clash cid="33" atom="O" dist="2.26" clashmag="0.48"/>
<clash cid="34" atom="HD12" dist="2.02" clashmag="0.41"/>
<clash cid="35" atom="HG21" dist="1.95" clashmag="0.48"/>
<clash cid="36" atom="HD11" dist="1.88" clashmag="0.55"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="SER" seq="158" resnum="158" icode="" altcode="" phi="74.0" psi="-17.4" rama="Allowed" rota="p">
<clash cid="33" atom="OG" dist="2.26" clashmag="0.48"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="159" resnum="159" icode="" altcode="" phi="-140.6" psi="82.7" rama="Favored" rota="m-20"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PRO" seq="160" resnum="160" icode="" altcode="" phi="-67.5" psi="150.7" rama="Favored" rota="Cg_endo">
<clash cid="34" atom="HA" dist="2.02" clashmag="0.41"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LYS" seq="161" resnum="161" icode="" altcode="" phi="-127.6" psi="137.9" rama="Favored" rota="ptpt"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLY" seq="162" resnum="162" icode="" altcode="" phi="-80.7" psi="178.1" rama="Favored"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="TYR" seq="163" resnum="163" icode="" altcode="" phi="-81.8" psi="-25.0" rama="Favored" rota="m-85"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="164" resnum="164" icode="" altcode="" phi="-116.7" psi="157.1" rama="Favored" rota="mp"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="THR" seq="165" resnum="165" icode="" altcode="" phi="-148.8" psi="173.0" rama="Favored" rota="m">
<clash cid="37" atom="HG22" dist="2.30" clashmag="0.45"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="TYR" seq="166" resnum="166" icode="" altcode="" phi="-101.3" psi="118.1" rama="Favored" rota="m-85">
<clash cid="37" atom="N" dist="2.30" clashmag="0.45"/>
<clash cid="38" atom="OH" dist="2.31" clashmag="0.45"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="SER" seq="167" resnum="167" icode="" altcode="" phi="-102.6" psi="125.2" rama="Favored" rota="p">
<clash cid="39" atom="OG" dist="2.21" clashmag="0.59"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="168" resnum="168" icode="" altcode="" phi="-113.4" psi="130.3" rama="Favored" rota="t"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LYS" seq="169" resnum="169" icode="" altcode="" phi="-111.6" psi="114.3" rama="Favored" rota="mtpp"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="TYR" seq="170" resnum="170" icode="" altcode="" phi="-89.3" psi="144.2" rama="Favored" rota="m-85"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLU" seq="171" resnum="171" icode="" altcode="" phi="-84.8" psi="125.3" rama="Favored" rota="tp10"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="172" resnum="172" icode="" altcode="" phi="-62.4" psi="-45.8" rama="Favored" rota="t70"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLN" seq="173" resnum="173" icode="" altcode="" phi="-57.5" psi="139.4" rama="Favored" rota="mm-40"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="174" resnum="174" icode="" altcode="" phi="85.2" psi="-3.6" rama="Allowed" rota="m-30"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="THR" seq="175" resnum="175" icode="" altcode="" phi="-113.0" psi="156.4" rama="Favored" rota="t"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LYS" seq="176" resnum="176" icode="" altcode="" rota="ttpp"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="SER" seq="183" resnum="183" icode="" altcode="" phi="-175.5" psi="159.4" rama="Favored" rota="t"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLU" seq="184" resnum="184" icode="" altcode="" phi="-60.9" psi="-70.7" rama="Allowed" rota="tm-20">
<clash cid="40" atom="O" dist="2.04" clashmag="0.56"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ALA" seq="185" resnum="185" icode="" altcode="" phi="-61.5" psi="-25.3" rama="Favored"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="187" resnum="187" icode="" altcode="" phi="-71.3" psi="-18.5" rama="Favored" rota="m-20"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ARG" seq="188" resnum="188" icode="" altcode="" phi="-60.5" psi="-26.4" rama="Favored" rota="mmm-85">
<clash cid="40" atom="HG2" dist="2.04" clashmag="0.56"/>
<clash cid="41" atom="NH2" dist="2.35" clashmag="0.42"/>
<clash cid="42" atom="HH22" dist="2.16" clashmag="0.58"/>
<clash cid="43" atom="HH22" dist="1.75" clashmag="0.51"/>
<clash cid="44" atom="HH22" dist="1.84" clashmag="0.43"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="189" resnum="189" icode="" altcode="" phi="-102.9" psi="-62.2" rama="Favored" rota="mt"/>
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<clash cid="45" atom="HG12" dist="2.01" clashmag="0.42"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLY" seq="191" resnum="191" icode="" altcode="" phi="-55.0" psi="-58.0" rama="Favored"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="THR" seq="193" resnum="193" icode="" altcode="" phi="-65.3" psi="-48.2" rama="Favored" rota="m">
<clash cid="46" atom="HA" dist="2.01" clashmag="0.42"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="194" resnum="194" icode="" altcode="" phi="-64.3" psi="-49.0" rama="Favored" rota="t"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="196" resnum="196" icode="" altcode="" phi="-80.1" psi="-48.1" rama="Favored" rota="tp">
<clash cid="47" atom="HD23" dist="1.70" clashmag="0.74"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="197" resnum="197" icode="" altcode="" phi="-100.0" psi="105.5" rama="Favored" rota="m-30">
<clash cid="48" atom="HD2" dist="1.74" clashmag="0.52"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LYS" seq="198" resnum="198" icode="" altcode="" phi="-128.2" psi="-178.7" rama="Favored" rota="ptpt">
<clash cid="49" atom="O" dist="2.06" clashmag="0.55"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="TYR" seq="199" resnum="199" icode="" altcode="" phi="-93.7" psi="106.9" rama="Favored" rota="t80" cis_peptide="yes">
<clash cid="50" atom="CE1" dist="2.48" clashmag="0.47"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLY" seq="200" resnum="200" icode="" altcode="" phi="-147.1" psi="156.4" rama="Favored">
<clash cid="49" atom="HA2" dist="2.06" clashmag="0.55"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ALA" seq="201" resnum="201" icode="" altcode="" phi="-117.4" psi="127.3" rama="Favored"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ALA" seq="202" resnum="202" icode="" altcode="" phi="-57.1" psi="-69.4" rama="Allowed"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="204" resnum="204" icode="" altcode="" phi="-115.4" psi="134.2" rama="Favored" rota="p">
<clash cid="51" atom="CG1" dist="2.45" clashmag="0.47"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASN" seq="205" resnum="205" icode="" altcode="" phi="-141.4" psi="155.7" rama="Favored" rota="p30">
<clash cid="39" atom="OD1" dist="2.21" clashmag="0.59"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="206" resnum="206" icode="" altcode="" phi="-80.1" psi="147.4" rama="Favored" rota="mp">
<clash cid="52" atom="HB" dist="1.90" clashmag="0.53"/>
<clash cid="53" atom="O" dist="2.12" clashmag="0.49"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="207" resnum="207" icode="" altcode="" phi="-165.8" psi="177.8" rama="Favored" rota="p-10"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="208" resnum="208" icode="" altcode="" phi="-64.9" psi="155.0" rama="Favored" rota="mp"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASN" seq="209" resnum="209" icode="" altcode="" phi="-97.2" psi="117.8" rama="Favored" rota="t30">
<clash cid="54" atom="ND2" dist="2.25" clashmag="0.69"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ARG" seq="210" resnum="210" icode="" altcode="" phi="-83.5" psi="-14.5" rama="Favored" rota="ptp85"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="211" resnum="211" icode="" altcode="" phi="-79.3" psi="-10.9" rama="Favored" rota="p30">
<clash cid="54" atom="OD1" dist="2.25" clashmag="0.69"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="212" resnum="212" icode="" altcode="" phi="-93.3" psi="-58.6" rama="Favored" rota="t80"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="213" resnum="213" icode="" altcode="" phi="-85.3" psi="110.1" rama="Favored" rota="m-85">
<clash cid="55" atom="HB3" dist="1.99" clashmag="0.43"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="214" resnum="214" icode="" altcode="" phi="-110.3" psi="179.1" rama="Favored" rota="m-20"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="THR" seq="215" resnum="215" icode="" altcode="" phi="-66.7" psi="-35.5" rama="Favored" rota="m"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ALA" seq="216" resnum="216" icode="" altcode="" phi="-63.1" psi="-14.2" rama="Favored"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="THR" seq="217" resnum="217" icode="" altcode="" phi="-90.3" psi="-8.0" rama="Favored" rota="m"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLY" seq="218" resnum="218" icode="" altcode="" phi="79.6" psi="1.7" rama="Favored"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="219" resnum="219" icode="" altcode="" phi="-84.8" psi="138.6" rama="Favored" rota="mt">
<clash cid="55" atom="HD12" dist="1.99" clashmag="0.43"/>
<clash cid="56" atom="HA" dist="1.98" clashmag="0.46"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="220" resnum="220" icode="" altcode="" phi="-112.9" psi="107.6" rama="Favored" rota="t0"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="221" resnum="221" icode="" altcode="" phi="-102.5" psi="101.4" rama="Favored" rota="mt"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="THR" seq="222" resnum="222" icode="" altcode="" phi="-136.8" psi="-64.6" rama="Allowed" rota="m"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LYS" seq="223" resnum="223" icode="" altcode="" phi="-63.9" psi="-6.8" rama="Favored" rota="mmtm">
<clash cid="57" atom="HD2" dist="2.35" clashmag="0.41"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLY" seq="224" resnum="224" icode="" altcode="" phi="104.0" psi="-23.9" rama="Favored"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="225" resnum="225" icode="" altcode="" phi="-108.9" psi="129.6" rama="Favored" rota="pp">
<clash cid="58" atom="HG23" dist="1.90" clashmag="0.54"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PRO" seq="226" resnum="226" icode="" altcode="" phi="-56.8" psi="132.9" rama="Favored" rota="Cg_endo"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="227" resnum="227" icode="" altcode="" phi="-126.2" psi="113.3" rama="Favored" rota="mt"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="228" resnum="228" icode="" altcode="" phi="-114.1" psi="110.6" rama="Favored" rota="t">
<clash cid="56" atom="HG22" dist="1.98" clashmag="0.46"/>
<clash cid="59" atom="HG11" dist="2.01" clashmag="0.42"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLN" seq="229" resnum="229" icode="" altcode="" phi="-105.2" psi="138.5" rama="Favored" rota="pt20" cis_peptide="yes"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="230" resnum="230" icode="" altcode="" phi="-133.7" psi="111.6" rama="Favored" rota="p-10">
<clash cid="60" atom="N" dist="2.49" clashmag="0.45"/>
<clash cid="60" atom="OD1" dist="2.49" clashmag="0.45"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="231" resnum="231" icode="" altcode="" phi="-91.7" psi="-75.5" rama="Allowed" rota="mt">
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<clash cid="62" atom="HB2" dist="1.85" clashmag="0.59"/>
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<clash cid="65" atom="HD23" dist="1.93" clashmag="0.50"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="232" resnum="232" icode="" altcode="" phi="-84.2" psi="117.2" rama="Favored" rota="mt">
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="233" resnum="233" icode="" altcode="" phi="-115.9" psi="114.5" rama="Favored" rota="t"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="235" resnum="235" icode="" altcode="" phi="-134.5" psi="123.4" rama="Favored" rota="pp" cis_peptide="yes">
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLY" seq="236" resnum="236" icode="" altcode="" phi="-143.6" psi="154.3" rama="Favored"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ALA" seq="239" resnum="239" icode="" altcode="" phi="62.1" psi="-123.7" rama="Allowed"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="SER" seq="244" resnum="244" icode="" altcode="" phi="-57.1" psi="-46.3" rama="Favored" rota="m"/>
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<clash cid="71" atom="HB2" dist="2.13" clashmag="0.49"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="TYR" seq="247" resnum="247" icode="" altcode="" phi="-64.5" psi="-44.2" rama="Favored" rota="t80"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="SER" seq="249" resnum="249" icode="" altcode="" phi="-58.5" psi="-29.4" rama="Favored" rota="p">
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<clash cid="62" atom="HB2" dist="1.85" clashmag="0.59"/>
<clash cid="63" atom="CB" dist="2.45" clashmag="0.47"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLY" seq="250" resnum="250" icode="" altcode="" phi="-61.0" psi="-47.6" rama="Favored"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="252" resnum="252" icode="" altcode="" phi="-58.8" psi="-35.7" rama="Favored" rota="mp"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="MET" seq="253" resnum="253" icode="" altcode="" phi="-77.3" psi="-42.8" rama="Favored" rota="mmm">
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="254" resnum="254" icode="" altcode="" phi="-65.2" psi="-20.3" rama="Favored" rota="m">
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="255" resnum="255" icode="" altcode="" phi="-80.2" psi="-33.3" rama="Favored" rota="tp"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASN" seq="262" resnum="262" icode="" altcode="" phi="65.8" psi="-138.1" rama="Allowed" rota="t30">
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ARG" seq="263" resnum="263" icode="" altcode="" phi="44.9" psi="76.9" rama="Allowed" rota="mtm105">
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="264" resnum="264" icode="" altcode="" phi="-64.2" psi="156.5" rama="Favored" rota="mt">
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="265" resnum="265" icode="" altcode="" phi="-117.4" psi="137.0" rama="Favored" rota="t">
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="266" resnum="266" icode="" altcode="" phi="-118.3" psi="159.1" rama="Favored" rota="mt">
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="267" resnum="267" icode="" altcode="" phi="-76.3" psi="112.2" rama="Favored" rota="t">
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLY" seq="268" resnum="268" icode="" altcode="" phi="-82.1" psi="-52.8" rama="Favored"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="373" resnum="373" icode="" altcode="" phi="-51.2" psi="-30.8" rama="Favored" rota="m-20">
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<clash cid="259" atom="H" dist="2.22" clashmag="0.42"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLU" seq="503" resnum="503" icode="" altcode="" phi="-60.3" psi="-27.9" rama="Favored" rota="tt0"/>
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<clash cid="214" atom="CB" dist="1.89" clashmag="0.85"/>
<clash cid="215" atom="HB2" dist="1.45" clashmag="0.82"/>
<clash cid="216" atom="HB3" dist="1.75" clashmag="0.45"/>
<clash cid="218" atom="HB2" dist="2.18" clashmag="0.56"/>
<clash cid="219" atom="CB" dist="2.69" clashmag="0.49"/>
<clash cid="260" atom="O" dist="2.16" clashmag="0.45"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PRO" seq="505" resnum="505" icode="" altcode="" phi="-91.4" psi="83.5" rama="Allowed" rota="Cg_endo" cis_peptide="yes">
<clash cid="261" atom="HG2" dist="2.49" clashmag="0.43"/>
<clash cid="262" atom="HA" dist="1.59" clashmag="0.42"/>
<clash cid="263" atom="HG3" dist="2.14" clashmag="0.48"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="SER" seq="506" resnum="506" icode="" altcode="" phi="-142.1" psi="141.8" rama="Favored" rota="p">
<plane-outlier type="peptide" omega="133.87"/>
<clash cid="260" atom="HA" dist="2.16" clashmag="0.45"/>
<clash cid="262" atom="HA" dist="1.59" clashmag="0.42"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="SER" seq="507" resnum="507" icode="" altcode="" phi="-101.3" psi="91.5" rama="Favored" rota="p"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="510" resnum="510" icode="" altcode="" phi="-65.8" psi="-32.4" rama="Favored" rota="m"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="VAL" seq="511" resnum="511" icode="" altcode="" phi="-66.5" psi="-41.2" rama="Favored" rota="t"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLU" seq="513" resnum="513" icode="" altcode="" phi="-81.6" psi="-20.9" rama="Favored" rota="pt-20"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="514" resnum="514" icode="" altcode="" phi="-72.5" psi="-33.7" rama="Favored" rota="m-30"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="515" resnum="515" icode="" altcode="" phi="-71.8" psi="-50.4" rama="Favored" rota="mt">
<clash cid="264" atom="HD12" dist="2.01" clashmag="0.43"/>
<clash cid="265" atom="HG21" dist="1.90" clashmag="0.54"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="516" resnum="516" icode="" altcode="" phi="-60.9" psi="-31.9" rama="Favored" rota="mt"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="517" resnum="517" icode="" altcode="" phi="-72.6" psi="-36.0" rama="Favored" rota="t80">
<clash cid="266" atom="CE2" dist="2.46" clashmag="0.51"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ALA" seq="518" resnum="518" icode="" altcode="" phi="-72.2" psi="-20.7" rama="Favored"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LEU" seq="519" resnum="519" icode="" altcode="" phi="-87.2" psi="-62.0" rama="Allowed" rota="mt"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="520" resnum="520" icode="" altcode="" phi="-60.2" psi="-39.2" rama="Favored" rota="m-30"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="521" resnum="521" icode="" altcode="" phi="-128.2" psi="76.8" rama="Favored" rota="m-85"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PRO" seq="522" resnum="522" icode="" altcode="" phi="-67.9" psi="-35.3" rama="Favored" rota="Cg_exo">
<clash cid="267" atom="HG2" dist="1.78" clashmag="0.66"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="THR" seq="523" resnum="523" icode="" altcode="" phi="-73.0" psi="-47.7" rama="Favored" rota="m"/>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLU" seq="524" resnum="524" icode="" altcode="" phi="-55.3" psi="-45.1" rama="Favored" rota="mt-10">
<clash cid="268" atom="O" dist="2.12" clashmag="0.50"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="525" resnum="525" icode="" altcode="" phi="-59.4" psi="-35.3" rama="Favored" rota="t80">
<clash cid="269" atom="O" dist="1.76" clashmag="0.85"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASN" seq="526" resnum="526" icode="" altcode="" phi="-66.1" psi="-25.5" rama="Favored" rota="t30">
<clash cid="270" atom="HD21" dist="1.60" clashmag="0.49"/>
<clash cid="271" atom="HB2" dist="1.92" clashmag="0.50"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ARG" seq="527" resnum="527" icode="" altcode="" phi="-80.9" psi="-59.0" rama="Favored" rota="mtm-85">
<clash cid="254" atom="NH1" dist="2.51" clashmag="0.44"/>
<clash cid="256" atom="HD2" dist="2.46" clashmag="0.56"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="528" resnum="528" icode="" altcode="" phi="-89.4" psi="12.3" rama="Allowed" rota="pp">
<clash cid="266" atom="HD11" dist="2.46" clashmag="0.51"/>
<clash cid="268" atom="HG13" dist="2.12" clashmag="0.50"/>
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<clash cid="272" atom="HG13" dist="1.56" clashmag="0.47"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="LYS" seq="529" resnum="529" icode="" altcode="" phi="-59.2" psi="-19.7" rama="Favored" rota="pttp">
<clash cid="269" atom="HB3" dist="1.76" clashmag="0.85"/>
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<clash cid="274" atom="HB2" dist="1.64" clashmag="0.63"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="GLY" seq="530" resnum="530" icode="" altcode="" phi="-74.2" psi="-50.9" rama="Favored">
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<clash cid="276" atom="O" dist="2.02" clashmag="0.60"/>
</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASP" seq="531" resnum="531" icode="" altcode="" phi="-73.1" psi="-23.7" rama="Favored" rota="p-10">
<clash cid="277" atom="N" dist="2.37" clashmag="0.51"/>
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</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ILE" seq="532" resnum="532" icode="" altcode="" phi="-57.5" psi="-41.5" rama="Favored" rota="mt"/>
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<clash cid="276" atom="HB3" dist="2.02" clashmag="0.60"/>
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</ModelledSubgroup>
<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="ASN" seq="534" resnum="534" icode="" altcode="" phi="-67.1" psi="-23.8" rama="Favored" rota="p30"/>
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<ModelledSubgroup model="1" chain="B" said="A" ent="1" resname="PHE" seq="540" resnum="540" icode="" altcode="" phi="-62.2" psi="-26.6" rama="Favored" rota="m-85">
<clash cid="279" atom="CD1" dist="2.53" clashmag="0.44"/>