Description:
LINCS algorithm
.. py:class:: BondConstraint(all_info) Constructor of a bond bonstraint object. :param AllInfo all_info: System information. .. py:function:: setParams(string type, float k, float r0) specifies the bond constraint parameters with bond type and equilibrium length. .. py:function:: setNumIters(int ncycles) specifies the number of iterations of calcuation. .. py:function:: setExpansionOrder(int order) specifies the spread order. Example:: bondconstraint = gala.BondConstraint(all_info)# bond constraints using LINCS algorithm bondconstraint.setParams('oh', 0.09572)#(type, r0) bondconstraint.setParams('hh', 0.15139)#(type, r0) bondconstraint.setExpansionOrder(4) bondconstraint.setNumIters(1) app.add(bondconstraint)