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What is the specific meaning of the third column in the parameter res.dffMatFilter? #28

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xujiameng opened this issue Feb 20, 2024 · 1 comment

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@xujiameng
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In the main output, res.dffMatFilter is a matrix of size (num, Frame, 2), where the first column represents the calcium event index, and the second column contains the df/f values at different frames. However, I do not understand the specific meaning of the third column. Could you please explain? Thank you.

@XuelongMi
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dffMat(:,:,1) is the dff calculated from raw data. For example, dffMat(i,:,1) is the curve for event i.
dffMat(:,:,2) is the dff after removing the contributions from other events (like setting the values of other event voxels to nan value, imputed by nearby values, then calculating dff).

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