README.rst
notebooks/Q1-singularity-preprocessing.ipynb notebooks/Q2-object-prep.ipynb notebooks/Q3-analysis.ipynb notebooks/Q4-singularity-changeo.ipynb notebooks/Q5-pseudobulk.ipynb
notebooks/1_dandelion_preprocessing-10x_data.ipynb notebooks/1b_dandelion_noreannotation-10x_data.ipynb notebooks/1c_dandelion_scirpy.ipynb notebooks/2_dandelion_filtering-10x_data.ipynb notebooks/3_dandelion_findingclones-10x_data.ipynb notebooks/4_dandelion_visualization-10x_data.ipynb notebooks/5_dandelion_diversity_and_mutation-10x_data.ipynb notebooks/7_dandelion_TCR_data_10x_data.ipynb notebooks/8-pseudobulk-trajectory.ipynb notebooks/0_dandelion_primer.ipynb notebooks/6_dandelion_running_from_R-10x_data.ipynb
api