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24 Open 19 Closed
24 Open 19 Closed
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Issues list

plot_synteny with multiple targets/queries
#44 opened Apr 21, 2023 by SAMtoBAM
bug: plot_coverage breaks if using target=FALSE andd fill="qname"
#43 opened Mar 30, 2023 by MmasterT
remove labels on coverage plot
#42 opened Dec 21, 2022 by svedwards
clean up large dotplots
#41 opened Dec 21, 2022 by svedwards
Can the switch the target to x-axis and query to y-axis?
#40 opened Oct 22, 2022 by gematakbir
excessive memory usage.
#39 opened Oct 6, 2022 by callumparr
combine replicates
#38 opened Sep 6, 2022 by mbartl13
NA introduced by coercion
#37 opened Apr 28, 2022 by btredcup
Can't read dotplot results
#36 opened Mar 31, 2022 by Estherrr1997
1
Overlay multiple pafs
#35 opened Mar 30, 2022 by mbartl13
display of dot plot
#34 opened Feb 22, 2022 by zhaotao1987
1
changing axis labels
#33 opened Jan 21, 2022 by melodysyue
1
dotplot display
#32 opened Nov 5, 2021 by mdsufz
plot_synteny error when target length is > query length
#31 opened Oct 21, 2021 by mountainmanjared
Can pafr display the percentage of reference sequences aligned by query in Coverage plot?
#30 opened Aug 31, 2021 by Xiao-Zhong
1
Expand scale_fill_brew palette in pafr
#29 opened Jul 28, 2021 by aaronphillips7493
1
Make synteny plot colours user settable
#28 opened Jul 20, 2021 by dwinter
How to find which coordinates are repeating in target chromosomes
#27 opened Jun 9, 2021 by khush876
2
.paf to circos? enhancement New feature or request
#26 opened Apr 29, 2021 by dwinter
@dwinter
1
plot_synteny() breaks for query/target with same name bug Something isn't working
#25 opened Apr 23, 2021 by philippbayer 0.1
@dwinter
dotplot order by tstart enhancement New feature or request
#24 opened Mar 13, 2021 by ruolin 0.1
@dwinter
1
set size of sequence labels in dotplot() enhancement New feature or request
#23 opened Feb 23, 2021 by fraca 0.1
3
Error in r[["strand"]] : subscript out of bounds
#22 opened Dec 29, 2020 by DanielleMStevens 0.1
1
paf to syri
#19 opened Nov 14, 2019 by dwinter
ProTip! no:milestone will show everything without a milestone.