Bump version

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: restez
 Type: Package
 Title: Create and Query a Local Copy of 'GenBank' in R
-Version: 1.1.0
+Version: 2.0.0
 Authors@R: c(
   person(
     given = "Joel H.",

NEWS.md

@@ -1,25 +1,47 @@
-# restez 1.1.0
+restez 2.0.0 (2022-07-07)
+=========================
 
-## Bug fixes
+### BUG FIXES
+
+* Migrate to duckdb (#18, #26)
+
+### DOCUMENTATION
+
+* Update to correct github repo (#28)
+
+### NEW FEATURES
+
+* Add option to connect to database in read-only mode (91b85f6dd24153c16be1cf74a712e5349e31c679)
+
+### OTHER
+
+* Switch CI from travis to github actions (9cc52e888accf489310b604b2636ffbfd0acecd7)
+
+restez 1.1.0 (2022-06-03)
+=========================
+
+### BUG FIXES
 
 * Fix bug where single extremely long sequence caused db_create() to die (#14)
 
-## New features
+### NEW FEATURES
 
 * Add ability to filter database by accession number upon creation (#25)
 
-## Other
+### OTHER
 
 * Change maintainer to [Joel Nitta](https://github.com/joelnitta)
 
-# restez 1.0.1
+restez 1.0.1 (2019-01-07)
+=========================
 
-## Bug fixes
+### BUG FIXES
 
 * Check internet connection in mainland China
 
-# restez 1.0.0
-
-## Post-review version of `restez` released.
+restez 1.0.0 (2018-11-27)
+=========================
 
+### OTHER
+* Post-review version of `restez` released.
 * Download and query parts of GenBank from within R

README.Rmd

@@ -25,7 +25,7 @@ knitr::opts_chunk$set(
 
 > NOTE: `restez` is no longer available on CRAN due to the archiving of a key dependency ([MonetDBLite](https://github.com/MonetDB/MonetDBLite-R)). It can still be installed via GitHub. The issue is being dealt with and hopefully a new version of `restez` will be available on CRAN soon.
 
-> ADDITIONAL NOTE (2022-07-07): MonetDBLite has now been replaced with [duckdb](https://github.com/duckdb/duckdb) in the development version, which should allow for submission to CRAN. Becauase of the change, the development verion **is not compatible with databases built with previous versions of restez**.
+> ADDITIONAL NOTE (2022-07-07): MonetDBLite has now been replaced with [duckdb](https://github.com/duckdb/duckdb) in version 2.0.0, which should allow for submission to CRAN. Because of this change, restez v2.0.0 or higher **is not compatible with databases built with previous versions of restez**.
 
 Download parts of [NCBI's GenBank](https://www.ncbi.nlm.nih.gov/nuccore) to a local folder and create a simple SQL-like database. Use 'get' tools to query the database by accession IDs. [rentrez](https://github.com/ropensci/rentrez) wrappers are available, so that if sequences are not available locally they can be searched for online through [Entrez](https://www.ncbi.nlm.nih.gov/books/NBK25500/).
 

codemeta.json

@@ -8,7 +8,7 @@
   "codeRepository": "https://github.com/ropensci/restez",
   "issueTracker": "https://github.com/ropensci/restez/issues",
   "license": "https://spdx.org/licenses/MIT",
-  "version": "1.1.0",
+  "version": "2.0.0",
   "programmingLanguage": {
     "@type": "ComputerLanguage",
     "name": "R",
@@ -213,7 +213,7 @@
     },
     "SystemRequirements": null
   },
-  "fileSize": "1656.282KB",
+  "fileSize": "1656.229KB",
   "citation": [
     {
       "@type": "ScholarlyArticle",
@@ -278,10 +278,12 @@
     }
   ],
   "releaseNotes": "https://github.com/ropensci/restez/blob/master/NEWS.md",
-  "contIntegration": ["https://travis-ci.org/ropensci/restez", "https://coveralls.io/github/ropensci/restez?branch=master"],
+  "readme": "https://github.com/ropensci/restez/blob/main/README.md",
+  "contIntegration": ["https://github.com/ropensci/restez/actions", "https://coveralls.io/github/ropensci/restez?branch=master"],
   "review": {
     "@type": "Review",
     "url": "https://github.com/ropensci/software-review/issues/232",
     "provider": "https://ropensci.org"
-  }
+  },
+  "keywords": ["genbank", "dna", "sequence", "entrez", "r", "r-package", "rstats"]
 }