Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Adding distributions and log scores for K-Normal-Mixture #265

Open
wants to merge 3 commits into
base: master
Choose a base branch
from

Conversation

soumyasahu
Copy link
Collaborator

I have coded the log score and the derivatives based on the attached derivations.
Implementation_of_Mixture_Normal_Density_in_NGBoost.pdf

To map the mixture proportions I have used multivariate logit transformation. The inverse of the Jacobian of this transformation is required to find 'd_score'. This can be calculated in a closed-form in the following way,
Inv_jaccobian.pdf

The exact Fisher information matrix can be calculated but the expressions of double derivatives will be ugly. I shall give it a try later.

For initial values, K-means clustering has been used where sample proportions, means, and variances from each cluster are considered as mixture proportions, mean, and variance of each normal distribution.

@alejandroschuler
Copy link
Collaborator

The math and implementation look good to me. @ryan-wolbeck do you know what's going on with the failing checks?

@ryan-wolbeck ryan-wolbeck added the enhancement New feature or request label Jun 18, 2021
@ryan-wolbeck
Copy link
Collaborator

ryan-wolbeck commented Jul 1, 2021

@soumyasahu can you take a look at fixing the following

************* Module ngboost.distns.mixture_normal
ngboost/distns/mixture_normal.py:3:0: C0414: Import alias does not rename original package (useless-import-alias)
ngboost/distns/mixture_normal.py:50:57: E0602: Undefined variable 'mixprop' (undefined-variable)
ngboost/distns/mixture_normal.py:55:78: E1130: bad operand type for unary -: NoneType (invalid-unary-operand-type)
ngboost/distns/mixture_normal.py:55:78: E1130: bad operand type for unary -: str (invalid-unary-operand-type)
ngboost/distns/mixture_normal.py:66:8: W0231: init method from base class 'RegressionDistn' is not called (super-init-not-called)
ngboost/distns/mixture_normal.py:111:12: W0612: Unused variable 'n' (unused-variable)
ngboost/distns/mixture_normal.py:3:0: W0611: Unused math imported as math (unused-import)
ngboost/distns/mixture_normal.py:6:0: W0611: Unused pandas imported as pd (unused-import)
ngboost/distns/mixture_normal.py:7:0: W0611: Unused import scipy (unused-import)
ngboost/distns/mixture_normal.py:8:0: W0611: Unused laplace imported from scipy.stats as dist (unused-import)

@soumyasahu
Copy link
Collaborator Author

I think I have fixed other issuses apart from the followings:

ngboost/distns/mixture_normal.py:3:0: C0414: Import alias does not rename original package (useless-import-alias)
ngboost/distns/mixture_normal.py:55:78: E1130: bad operand type for unary -: NoneType (invalid-unary-operand-type)
ngboost/distns/mixture_normal.py:55:78: E1130: bad operand type for unary -: str (invalid-unary-operand-type)
ngboost/distns/mixture_normal.py:66:8: W0231: init method from base class 'RegressionDistn' is not called (super-init-not-called)

Actually, I don't understand these issues. One problem may be -- 'RegressionDistn' is inside the function k_normal_mixture.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

3 participants