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137 Open 1,675 Closed
137 Open 1,675 Closed
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Issues list

Finetune nnUNet for different number of modality/ channels than pre-trained one
#2252 opened May 31, 2024 by mehnaz1985
@dojoh
Use the model
#2251 opened May 31, 2024 by Body123
@constantinulrich
2
Question of support file (.npy format)
#2250 opened May 31, 2024 by Lucarqi
@GregorKoehler
View the 2D slices of 3D data.
#2246 opened May 30, 2024 by jiashizuo
@TaWald
mps not supported
#2244 opened May 29, 2024 by tpecot
@Karol-G
4
AssertionError: Torch not compiled with CUDA enabled
#2243 opened May 29, 2024 by amspsingh04
@GregorKoehler
3
Inquiry Regarding Rank 0 and Mean Validation Dice Value "nan" with RuntimeWarning: Mean of empty slice means[r][m] = np.nanmean([i['metrics'][r][m] for i in results])
#2241 opened May 29, 2024 by Yuyeon-Kim
@Karol-G
RuntimeError: MultiThreadedAugmenter.abort_event was set, something went wrong. Maybe one of your workers crashed. This is not the actual error message! Look further up your stdout to see what caused the error. Please also check whether your RAM was full
#2239 opened May 29, 2024 by mehnaz1985
@dojoh
1
Meet with :RuntimeError: One or more background workers are no longer alive. Exiting. Please check the print statements above for the actual error message
#2238 opened May 28, 2024 by Huijin13
@FabianIsensee
1
Failed to find C compiler error when using ResEnc
#2237 opened May 28, 2024 by pwrightkcl
@dojoh
2
file not found nnUNetTrainer__nnUNetPlans__2d/dataset.json
#2236 opened May 28, 2024 by Body123
@Lars-Kraemer
1
Improve segmentation in a specific region
#2230 opened May 27, 2024 by Laurabc
@sten2lu
2
How to fine-tune the pretrained model?
#2229 opened May 27, 2024 by SiruLiu645
@mrokuss
1
Verification process: IndexError: index 189 is out of bounds for axis 0 with size 189
#2227 opened May 27, 2024 by Yanfeng-Zhou
@seziegler
8
Where is “nnUNetv2_plan_and_preprocess” code implemented? Can you publish it?
#2226 opened May 27, 2024 by zengjianyou
@dojoh
Questions about model accuracy
#2225 opened May 27, 2024 by DW1003
@ykirchhoff
Anyone investigated prediction performance of 5-fold versus 1-fold, with tta and without?
#2224 opened May 25, 2024 by mark-joe
@mrokuss
1
nnUNetv2_plan_and_preprocess_TypeError: 'NoneType' object is not callable
#2222 opened May 25, 2024 by ABMRI
@GregorKoehler
1
What label values to use?
#2220 opened May 24, 2024 by siamesecat14
@ykirchhoff
nnUNet V1 nnUNet_plan_and_preprocess
#2217 opened May 24, 2024 by hz1z
@Lars-Kraemer
GradCAM for nnU-Net
#2214 opened May 23, 2024 by Malitha123
@constantinulrich
1
When I use nnUNet for inference, it gets stuck at a certain step and cannot proceed. Changing the device doesn't help, and there are no error messages.
#2211 opened May 21, 2024 by lizflora
@saikat-roy
1
How to run inference with pretrained models nnUNetv2? nnUNetv3?
#2208 opened May 21, 2024 by ptlzon
@mrokuss
4
Environment file is needed
#2203 opened May 19, 2024 by vigor-jzhang
@Lars-Kraemer
1
Are the other backbones in the paper ”nnU-Net Revisited: A Call for Rigorous Validation in 3D Medical Image Segmentation“, such as implementation of STU-Net or SwinUNETRv2 in nnUNet will be available?
#2202 opened May 19, 2024 by VdaylightV
@ykirchhoff
1
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