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usage fix for bam2pairs
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SooLee committed Apr 24, 2018
1 parent 8215886 commit af9c8fc
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion util/bam2pairs/bam2pairs
Expand Up @@ -5,7 +5,7 @@ my $chrsizefile;
&GetOptions( 'l|leftmost' => sub { $pos_is_5end=0 },
'c|chromsize=s' => \$chrsizefile ); ## This defines ordering between mates

if(@ARGV<1){ &print_usage(); exit(); }
if(@ARGV<2){ &print_usage(); exit(); }
my $input = $ARGV[0];
my $prefix = $ARGV[1];
my $outpairs = "$prefix.bsorted.pairs";
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