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  • Hubbard Center for Genome Studies
  • Newmarket, NH

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@GlobalInvertebrateGenomicsAlliance
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Popular repositories

  1. MDIBL-T3-WGS-Tutorial MDIBL-T3-WGS-Tutorial Public

    Bacterial Genome Assembly and Assessment

    Python 21 11

  2. Assign-Taxonomy-with-BLAST Assign-Taxonomy-with-BLAST Public

    Assign taxonomy with blast, can be used for qiime

    Python 20 8

  3. MAKER-genome-annotations-tutorial MAKER-genome-annotations-tutorial Public

    Construct ab initio gene prediction using only BUSCO augustus models. Add in transcriptome for extra support

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  4. HCGS_Metabarcoding_Tutorials HCGS_Metabarcoding_Tutorials Public

    Workflow for qiime2 workshop

    Shell 10 6

  5. HCGS-Comparative-Genomics HCGS-Comparative-Genomics Public

    NCBI download and Orthofinder analysis

    10 2

  6. Nanopore-Workflow Nanopore-Workflow Public

    Working pipeline for nanopore + illumina data

    Shell 9 5