Skip to content

1.4.2
Compare
Choose a tag to compare
@d-cameron d-cameron released this 18 Aug 02:50
· 1133 commits to master since this release
v1.4.2
fb54db8
  • allowing colons in contig names. Parsing ambiguities are resolved in favour of the contig:position notation. #87
  • out of bounds kmers are now ignored (with log error message) instead of causing assembly abort #89
  • Fixed missing root cause log message when assembly failure is due to inconsistent input data and not due to an actual assembly error
  • Ignoring BEDPE records on contigs not found in the reference genome instead of crashing on them.
  • Adding line number logging of BEDPE parsing errors
  • Fixed BreakpointHomology out of bound error when breakpoint near contig bounds
  • Using string for BEDPE score for consistency with bedtools
  • Added AnnotateInexactHomologyBedpe command line tool
  • Corrected example to use BEDPE 0-based positioning for start (but not end)
Assets 3