Add visualizations package with dependencies.

Update baseline dependencies. Also reduce baseline long method. Update Roassal deprecated class names.
PolyMathOrg · Dec 27, 2023 · f24cbfb · f24cbfb
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commit f24cbfb
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diff --git a/src/BaselineOfPolyMath/BaselineOfPolyMath.class.st b/src/BaselineOfPolyMath/BaselineOfPolyMath.class.st
@@ -10,12 +10,13 @@ PolyMath is a Smalltalk project, similar to existing scientific libraries like N
 
 "
 Class {
-	#name : #BaselineOfPolyMath,
-	#superclass : #BaselineOf,
-	#category : #BaselineOfPolyMath
+	#name : 'BaselineOfPolyMath',
+	#superclass : 'BaselineOf',
+	#category : 'BaselineOfPolyMath',
+	#package : 'BaselineOfPolyMath'
 }
 
-{ #category : #baseline }
+{ #category : 'baselines' }
 BaselineOfPolyMath >> baseline: spec [
 
 	<baseline>
@@ -24,80 +25,13 @@ BaselineOfPolyMath >> baseline: spec [
 			sMark: spec;
 			xmlWriter: spec;
 			vectorMatrix: spec;
-			randomNumbers: spec.
+			randomNumbers: spec;
+			datasets: spec;
+			dataFrameInspector: spec.
 
-		spec
-			package: 'ExtendedNumberParser';
-			package: 'Math-Accuracy-Core';
-			package: 'Math-Accuracy-ODE' with: [ spec requires: #( 'Math-ODE' 'XMLWriter' ) ];
-			package: 'Math-ArbitraryPrecisionFloat' with: [ spec requires: #( 'ExtendedNumberParser' ) ];
-			package: 'Math-AutomaticDifferenciation' with: [ spec requires: #( 'Math-Numerical' 'MathVectorMatrix' ) ];
-			package: 'Math-Benchmarks-KDTree' with: [ spec requires: #( 'Math-KDTree' 'SMark' ) ];
-			package: 'Math-Benchmarks-ODE' with: [ spec requires: #( 'Math-ODE' 'SMark' 'XMLWriter' ) ];
-			package: 'Math-Chromosome' with: [ spec requires: #( 'MathVectorMatrix' ) ];
-			package: 'Math-Clustering' with: [ spec requires: #( 'Math-Numerical' 'Math-Core-Process' 'MathVectorMatrix' ) ];
-			package: 'Math-Complex' with: [ spec requires: #( 'Math-Numerical' 'Math-Polynomials' ) ];
-			package: 'Math-Helpers';
-			package: 'Math-Distributions' with: [ spec requires: #( 'MathVectorMatrix' 'Math-Quantile' 'Math-Core-Process' ) ];
-			package: 'Math-Core-Process';
-			package: 'Math-Numerical'
-			with: [ spec requires: #( 'MathVectorMatrix' 'Math-Core-Process' 'Math-Distributions' 'Math-StatisticalMoments'
-					   'Math-Series' ) ];
-			package: 'Math-Polynomials'
-			with: [ spec requires: #( 'MathVectorMatrix' 'Math-Core-Process' 'Math-Distributions' 'Math-StatisticalMoments'
-					   'Math-Series' ) ];
-			package: 'Math-FastFourierTransform' with: [ spec requires: #( 'Math-Complex' ) ];
-			package: 'Math-FunctionFit'
-			with: [ spec requires: #( 'Math-Numerical' 'Math-Chromosome' 'Math-Accuracy-Core' 'MathVectorMatrix' 'Math-Helpers' 'Math-Polynomials' ) ];
-			package: 'Math-KDTree';
-			package: 'Math-Number-Extensions';
-			package: 'Math-ODE' with: [ spec requires: #( 'Math-Numerical' 'MathVectorMatrix' 'Math-Polynomials' ) ];
-			package: 'Math-Permutation' with: [ spec requires: #( 'MathVectorMatrix' 'Math-Core-Process' ) ];
-			package: 'Math-Physics-Constants';
-			package: 'Math-PrincipalComponentAnalysis' with: [ spec requires: #( 'Math-Numerical' 'MathVectorMatrix' 'Math-Polynomials' ) ];
-			package: 'Math-Quantile';
-			package: 'Math-Quaternion' with: [ spec requires: #( 'Math-Complex' 'Math-Numerical' 'Math-Polynomials' ) ];
-			package: 'Math-Series';
-			package: 'Math-StatisticalMoments' with: [ spec requires: #( 'Math-Helpers' 'Math-Distributions' ) ];
-			package: 'Math-TSNE';
-			package: 'Math-Tests-Accuracy' with: [ spec requires: #( 'Math-Accuracy-Core' ) ];
-			package: 'Math-Tests-ArbitraryPrecisionFloat' with: [ spec requires: #( 'Math-ArbitraryPrecisionFloat' ) ];
-			package: 'Math-Tests-AutomaticDifferenciation' with: [ spec requires: #( 'Math-AutomaticDifferenciation' 'MathVectorMatrix' ) ];
-			package: 'Math-Tests-Clustering' with: [ spec requires: #( 'Math-Clustering' 'Math-Distributions' 'Math-UtilsDataServer' ) ];
-			package: 'Math-Tests-Complex' with: [ spec requires: #( 'Math-Complex' ) ];
-			package: 'Math-Tests-Distributions' with: [ spec requires: #( 'Math-Distributions' ) ];
-			package: 'Math-Tests-Core-Process' with: [ spec requires: #( 'Math-Core-Process' ) ];
-			package: 'Math-Tests-Numerical' with: [ spec requires: #( 'Math-Numerical' 'Math-UtilsDataServer' ) ];
-			package: 'Math-Tests-FastFourierTransform' with: [ spec requires: #( 'Math-FastFourierTransform' 'Math-Numerical' 'Math-Polynomials' ) ];
-			package: 'Math-Tests-FunctionFit';
-			package: 'Math-Tests-KDTree' with: [ spec requires: #( 'Math-KDTree' ) ];
-			package: 'Math-Tests-Number-Extensions' with: [ spec requires: #( 'Math-Number-Extensions' ) ];
-			package: 'Math-Tests-ODE' with: [ spec requires: #( 'Math-ODE' ) ];
-			package: 'Math-Tests-Permutation' with: [ spec requires: #( 'Math-Permutation' ) ];
-			package: 'Math-Tests-PrincipalComponentAnalysis' with: [ spec requires: #( 'Math-PrincipalComponentAnalysis' ) ];
-			package: 'Math-Tests-Quantile' with: [ spec requires: #( 'Math-Quantile' ) ];
-			package: 'Math-Tests-Polynomials' with: [ spec requires: #( 'Math-Polynomials' ) ];
-			package: 'Math-Tests-Quaternion' with: [ spec requires: #( 'Math-Quaternion' ) ];
-			package: 'Math-Tests-TSNE' with: [ spec requires: #( 'Math-TSNE' ) ];
-			package: 'Math-UtilsDataServer'.
-		spec
-			group: 'Accuracy' with: #( 'Math-Accuracy-ODE' 'Math-Accuracy-Core' );
-			group: 'Benchmarks' with: #( 'Math-Benchmarks-ODE' 'Math-Benchmarks-KDTree' );
-			group: 'Core'
-			with:
-				#( 'Math-Complex' 'Math-Quaternion' 'Math-Numerical' 'MathRandomNumbers' 'Math-KDTree' 'Math-ODE' 'Math-ArbitraryPrecisionFloat'
-				   'Math-FastFourierTransform' 'ExtendedNumberParser' 'Math-Quantile' 'Math-Physics-Constants' 'Math-Polynomials' 'Math-TSNE' 'Math-Core-Process'
-				   'Math-Helpers' 'MathVectorMatrix' 'Math-Distributions' );
-			group: 'Extensions'
-			with: #( 'Math-Clustering' 'Math-Number-Extensions' 'Math-Chromosome' 'Math-PrincipalComponentAnalysis' 'Math-FunctionFit' 'Math-AutomaticDifferenciation'
-				   'Math-Permutation' );
-			group: 'Tests'
-			with:
-				#( 'Math-Tests-Clustering' 'Math-Tests-Numerical' 'Math-Tests-Complex' 'Math-Tests-Quaternion' 'Math-Tests-ODE' 'Math-Tests-KDTree' 'Math-Tests-FunctionFit'
-				   'Math-Tests-AutomaticDifferenciation' 'Math-Tests-FastFourierTransform' 'Math-Tests-Accuracy' 'Math-Tests-ArbitraryPrecisionFloat'
-				   'Math-Tests-Quantile' 'Math-Tests-Polynomials' 'Math-Tests-PrincipalComponentAnalysis' 'Math-Tests-Number-Extensions' 'Math-Tests-Permutation'
-				   'Math-Tests-TSNE' 'Math-Tests-Core-Process' 'Math-Tests-Distributions' );
-			group: 'default' with: #( 'Core' 'Extensions' 'Tests' 'Benchmarks' 'Accuracy' ) ].
+		self 
+			packages: spec;
+			groups: spec ].
 
 	spec for: #( #'pharo6.x' #'pharo7.x' #'pharo8.x' #'pharo9.x' #'pharo10.x' ) do: [
 		spec
@@ -107,32 +41,195 @@ BaselineOfPolyMath >> baseline: spec [
 			package: 'Math-CompatibilityUpToPharo11' ]
 ]
 
-{ #category : #accessing }
+{ #category : 'dependencies' }
+BaselineOfPolyMath >> dataFrameInspector: spec [
+
+	spec
+		baseline: 'AIDataInspector'
+		with: [ spec repository: 'github://pharo-ai/data-inspector/src' ]
+]
+
+{ #category : 'dependencies' }
+BaselineOfPolyMath >> datasets: spec [
+
+	spec 
+		baseline: 'AIDatasets' 
+		with: [ spec repository: 'github://pharo-ai/datasets' ].
+]
+
+{ #category : 'baselines' }
+BaselineOfPolyMath >> groups: spec [
+
+	spec
+		group: 'Accuracy'
+		with: #( 'Math-Accuracy-ODE' 'Math-Accuracy-Core' );
+		group: 'Benchmarks'
+		with: #( 'Math-Benchmarks-ODE' 'Math-Benchmarks-KDTree' );
+		group: 'Core'
+		with:
+			#( 'Math-Complex' 'Math-Quaternion' 'Math-Numerical'
+			   'MathRandomNumbers' 'Math-KDTree' 'Math-ODE' 'Math-ArbitraryPrecisionFloat'
+			   'Math-FastFourierTransform' 'ExtendedNumberParser'
+			   'Math-Quantile' 'Math-Physics-Constants'
+			   'Math-Polynomials' 'Math-TSNE' 'Math-Core-Process'
+			   'Math-Helpers' 'MathVectorMatrix' 'Math-Distributions' );
+		group: 'Extensions'
+		with:
+			#( 'Math-Clustering' 'Math-Number-Extensions'
+			   'Math-Chromosome' 'Math-PrincipalComponentAnalysis'
+			   'Math-FunctionFit' 'Math-AutomaticDifferenciation'
+			   'Math-Permutation' );
+		group: 'Tests'
+		with: #( 'Math-Tests-Clustering' 'Math-Tests-Numerical'
+			   'Math-Tests-Complex' 'Math-Tests-Quaternion'
+			   'Math-Tests-ODE' 'Math-Tests-KDTree' 'Math-Tests-FunctionFit'
+			   'Math-Tests-AutomaticDifferenciation'
+			   'Math-Tests-FastFourierTransform'
+			   'Math-Tests-Accuracy' 'Math-Tests-ArbitraryPrecisionFloat'
+			   'Math-Tests-Quantile' 'Math-Tests-Polynomials'
+			   'Math-Tests-PrincipalComponentAnalysis'
+			   'Math-Tests-Number-Extensions' 'Math-Tests-Permutation'
+			   'Math-Tests-TSNE' 'Math-Tests-Core-Process'
+			   'Math-Tests-Distributions' );
+		group: 'visualizations'
+		with:
+			#( 'Core' 'Extensions' 'Tests' 'Benchmarks' 'Accuracy' 'Math-Visualizations' );
+		group: 'default'
+		with: #( 'Core' 'Extensions' 'Tests' 'Benchmarks' 'Accuracy' )
+]
+
+{ #category : 'baselines' }
+BaselineOfPolyMath >> packages: spec [
+
+	spec
+		package: 'ExtendedNumberParser';
+		package: 'Math-Accuracy-Core';
+		package: 'Math-Accuracy-ODE'
+		with: [ spec requires: #( 'Math-ODE' 'XMLWriter' ) ];
+		package: 'Math-ArbitraryPrecisionFloat'
+		with: [ spec requires: #( 'ExtendedNumberParser' ) ];
+		package: 'Math-AutomaticDifferenciation'
+		with: [ spec requires: #( 'Math-Numerical' 'MathVectorMatrix' ) ];
+		package: 'Math-Benchmarks-KDTree'
+		with: [ spec requires: #( 'Math-KDTree' 'SMark' ) ];
+		package: 'Math-Benchmarks-ODE'
+		with: [ spec requires: #( 'Math-ODE' 'SMark' 'XMLWriter' ) ];
+		package: 'Math-Chromosome'
+		with: [ spec requires: #( 'MathVectorMatrix' ) ];
+		package: 'Math-Clustering' with: [
+			spec requires:
+					#( 'Math-Numerical' 'Math-Core-Process' 'MathVectorMatrix' ) ];
+		package: 'Math-Complex'
+		with: [ spec requires: #( 'Math-Numerical' 'Math-Polynomials' ) ];
+		package: 'Math-Helpers';
+		package: 'Math-Distributions' with: [
+			spec requires:
+					#( 'MathVectorMatrix' 'Math-Quantile' 'Math-Core-Process' ) ];
+		package: 'Math-Core-Process';
+		package: 'Math-Numerical' with: [
+			spec requires:
+					#( 'MathVectorMatrix' 'Math-Core-Process' 'Math-Distributions'
+					   'Math-StatisticalMoments' 'Math-Series' ) ];
+		package: 'Math-Polynomials' with: [
+			spec requires:
+					#( 'MathVectorMatrix' 'Math-Core-Process' 'Math-Distributions'
+					   'Math-StatisticalMoments' 'Math-Series' ) ];
+		package: 'Math-FastFourierTransform'
+		with: [ spec requires: #( 'Math-Complex' ) ];
+		package: 'Math-FunctionFit' with: [
+			spec requires:
+					#( 'Math-Numerical' 'Math-Chromosome' 'Math-Accuracy-Core'
+					   'MathVectorMatrix' 'Math-Helpers' 'Math-Polynomials' ) ];
+		package: 'Math-KDTree';
+		package: 'Math-Number-Extensions';
+		package: 'Math-ODE' with: [
+			spec requires:
+					#( 'Math-Numerical' 'MathVectorMatrix' 'Math-Polynomials' ) ];
+		package: 'Math-Permutation'
+		with: [ spec requires: #( 'MathVectorMatrix' 'Math-Core-Process' ) ];
+		package: 'Math-Physics-Constants';
+		package: 'Math-PrincipalComponentAnalysis' with: [
+			spec requires:
+					#( 'Math-Numerical' 'MathVectorMatrix' 'Math-Polynomials' ) ];
+		package: 'Math-Quantile';
+		package: 'Math-Quaternion' with: [
+			spec requires:
+					#( 'Math-Complex' 'Math-Numerical' 'Math-Polynomials' ) ];
+		package: 'Math-Series';
+		package: 'Math-StatisticalMoments'
+		with: [ spec requires: #( 'Math-Helpers' 'Math-Distributions' ) ];
+		package: 'Math-TSNE';
+		package: 'Math-Tests-Accuracy'
+		with: [ spec requires: #( 'Math-Accuracy-Core' ) ];
+		package: 'Math-Tests-ArbitraryPrecisionFloat'
+		with: [ spec requires: #( 'Math-ArbitraryPrecisionFloat' ) ];
+		package: 'Math-Tests-AutomaticDifferenciation' with: [
+			spec requires:
+					#( 'Math-AutomaticDifferenciation'
+					   'MathVectorMatrix' ) ];
+		package: 'Math-Tests-Clustering' with: [
+			spec requires:
+					#( 'Math-Clustering' 'Math-Distributions' 'Math-UtilsDataServer' ) ];
+		package: 'Math-Tests-Complex'
+		with: [ spec requires: #( 'Math-Complex' ) ];
+		package: 'Math-Tests-Distributions'
+		with: [ spec requires: #( 'Math-Distributions' ) ];
+		package: 'Math-Tests-Core-Process'
+		with: [ spec requires: #( 'Math-Core-Process' ) ];
+		package: 'Math-Tests-Numerical'
+		with: [ spec requires: #( 'Math-Numerical' 'Math-UtilsDataServer' ) ];
+		package: 'Math-Tests-FastFourierTransform' with: [
+			spec requires:
+					#( 'Math-FastFourierTransform' 'Math-Numerical' 'Math-Polynomials' ) ];
+		package: 'Math-Tests-FunctionFit';
+		package: 'Math-Tests-KDTree'
+		with: [ spec requires: #( 'Math-KDTree' ) ];
+		package: 'Math-Tests-Number-Extensions'
+		with: [ spec requires: #( 'Math-Number-Extensions' ) ];
+		package: 'Math-Tests-ODE' with: [ spec requires: #( 'Math-ODE' ) ];
+		package: 'Math-Tests-Permutation'
+		with: [ spec requires: #( 'Math-Permutation' ) ];
+		package: 'Math-Tests-PrincipalComponentAnalysis'
+		with: [ spec requires: #( 'Math-PrincipalComponentAnalysis' ) ];
+		package: 'Math-Tests-Quantile'
+		with: [ spec requires: #( 'Math-Quantile' ) ];
+		package: 'Math-Tests-Polynomials'
+		with: [ spec requires: #( 'Math-Polynomials' ) ];
+		package: 'Math-Tests-Quaternion'
+		with: [ spec requires: #( 'Math-Quaternion' ) ];
+		package: 'Math-Tests-TSNE'
+		with: [ spec requires: #( 'Math-TSNE' ) ];
+		package: 'Math-UtilsDataServer';
+		package: 'Math-Visualizations'
+		with: [ spec requires: #( 'Roassal' 'AIDatasets' 'AIDataInspector') ]
+]
+
+{ #category : 'accessing' }
 BaselineOfPolyMath >> projectClass [
 	^ [ self class environment at: #MetacelloCypressBaselineProject ]
 		on: NotFound
 		do: [ super projectClass ]
 ]
 
-{ #category : #dependencies }
+{ #category : 'dependencies' }
 BaselineOfPolyMath >> randomNumbers: spec [
 
 	spec baseline: 'MathRandomNumbers' with: [ spec repository: 'github://PolyMathOrg/random-numbers:v1.x.x/src' ]
 ]
 
-{ #category : #dependencies }
+{ #category : 'dependencies' }
 BaselineOfPolyMath >> sMark: spec [
 
 	spec baseline: 'SMark' with: [ spec repository: 'github://smarr/SMark:v1.0.4' ]
 ]
 
-{ #category : #dependencies }
+{ #category : 'dependencies' }
 BaselineOfPolyMath >> vectorMatrix: spec [
 
 	spec baseline: 'MathVectorMatrix' with: [ spec repository: 'github://PolyMathOrg/vector-matrix:v1.x.x/src' ]
 ]
 
-{ #category : #dependencies }
+{ #category : 'dependencies' }
 BaselineOfPolyMath >> xmlWriter: spec [
 
 	spec baseline: 'XMLWriter' with: [ spec repository: 'github://pharo-contributions/XML-XMLWriter:2.9.x/src' ]

diff --git a/src/BaselineOfPolyMath/package.st b/src/BaselineOfPolyMath/package.st
@@ -1 +1 @@
-Package { #name : #BaselineOfPolyMath }
+Package { #name : 'BaselineOfPolyMath' }
diff --git a/src/Math-PrincipalComponentAnalysis/PMDataTransformer.class.st b/src/Math-PrincipalComponentAnalysis/PMDataTransformer.class.st
@@ -3,22 +3,23 @@ PMDataTransformer is the abstract root class of transformers. All data transform
 
 "
 Class {
-	#name : #PMDataTransformer,
-	#superclass : #Object,
-	#category : #'Math-PrincipalComponentAnalysis'
+	#name : 'PMDataTransformer',
+	#superclass : 'Object',
+	#category : 'Math-PrincipalComponentAnalysis',
+	#package : 'Math-PrincipalComponentAnalysis'
 }
 
-{ #category : #accessing }
+{ #category : 'accessing' }
 PMDataTransformer >> fit: aPMMatrix [
 	^ self subclassResponsibility
 ]
 
-{ #category : #accessing }
+{ #category : 'accessing' }
 PMDataTransformer >> fitAndTransform: aPMMatrix [
 	^ (self fit: aPMMatrix) transform: aPMMatrix
 ]
 
-{ #category : #transforming }
+{ #category : 'transforming' }
 PMDataTransformer >> transform: aPMMatrix [
 	^ self subclassResponsibility
 ]
diff --git a/src/Math-PrincipalComponentAnalysis/PMPrincipalComponentAnalyser.class.st b/src/Math-PrincipalComponentAnalysis/PMPrincipalComponentAnalyser.class.st
@@ -1,33 +1,34 @@
 Class {
-	#name : #PMPrincipalComponentAnalyser,
-	#superclass : #Object,
+	#name : 'PMPrincipalComponentAnalyser',
+	#superclass : 'Object',
 	#instVars : [
 		'componentsNumber'
 	],
-	#category : #'Math-PrincipalComponentAnalysis'
+	#category : 'Math-PrincipalComponentAnalysis',
+	#package : 'Math-PrincipalComponentAnalysis'
 }
 
-{ #category : #accessing }
+{ #category : 'accessing' }
 PMPrincipalComponentAnalyser >> componentsNumber [
 	^ componentsNumber
 ]
 
-{ #category : #accessing }
+{ #category : 'accessing' }
 PMPrincipalComponentAnalyser >> componentsNumber: anInteger [
 	componentsNumber := anInteger
 ]
 
-{ #category : #accessing }
+{ #category : 'accessing' }
 PMPrincipalComponentAnalyser >> fit: aPMMatrix [
 	^ self subclassResponsibility
 ]
 
-{ #category : #accessing }
+{ #category : 'accessing' }
 PMPrincipalComponentAnalyser >> fitAndTransform: aPMMatrix [
 	^ (self fit: aPMMatrix) transform: aPMMatrix
 ]
 
-{ #category : #accessing }
+{ #category : 'accessing' }
 PMPrincipalComponentAnalyser >> transform: aPMMatrix [
 	^ self subclassResponsibility
 ]