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@Shamir-Lab

Ron Shamir's Lab

Popular repositories

  1. Recycler Recycler Public

    This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran H…

    Python 58 7

  2. SCAPP SCAPP Public

    SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-021-01068-z

    Python 29 6

  3. PlasClass PlasClass Public

    A tool to classify sequences of plasmid or chromosomal origin. A paper describing this tool is available at: https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007781

    Python 24 7

  4. Multi-Omics-Cancer-Benchmark Multi-Omics-Cancer-Benchmark Public

    R 22 17

  5. Faucet Faucet Public

    This is the codebase for Faucet, described in our manuscript: https://academic.oup.com/bioinformatics/article/34/1/147/4004871, by Roye Rozov, Gil Goldshlager, Eran Halperin, and Ron Shamir

    C++ 17 3

  6. NEMO NEMO Public

    R 16 3

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