Pinned

1. bamsurgeon bamsurgeon Public

   tools for adding mutations to existing .bam files, used for testing mutation callers

   Python 226 83

2. tebreak tebreak Public

   Find and characterise transposable element insertions

   Python 21 5

3. tldr tldr Public

   Identify and annotate TE-mediated insertions in long-read sequence data

   Python 37 4

4. methylartist methylartist Public

   Tools for plotting methylation data in various ways

   Python 109 8

5. nanorama nanorama Public

   Real-time overview of nanopore targeted sequencing

   Python 2

6. GRIPper2 GRIPper2 Public

   Detect gene retrocopy insertion polymorphisms (GRIPs) from short-read paired-end WGS data

   Python 2