Pinned

1. kr-colab/discoal kr-colab/discoal Public

   discoal is a coalescent simulation program capable of simulating models with recombination, selective sweeps, and demographic changes including population splits, admixture events, and ancient samples

   TeX 46 10

2. popGenMachineLearningExamples popGenMachineLearningExamples Public

   simple examples of using supervised machine learning for population genetics inference

   Jupyter Notebook 36 9

3. kr-colab/diploSHIC kr-colab/diploSHIC Public

   feature-based deep learning for the identification of selective sweeps

   Python 48 14

4. popsim-consortium/stdpopsim popsim-consortium/stdpopsim Public

   A library of standard population genetic models

   Python 119 85

5. kr-colab/locator kr-colab/locator Public

   deep learning prediction of geographic location from individual genome sequences

   Python 46 16

6. kr-colab/ReLERNN kr-colab/ReLERNN Public

   Recombination Landscape Estimation using Recurrent Neural Networks

   Python 44 11