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BASE-9 Release 9.4.0

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@argiopetech argiopetech released this 03 Sep 20:42
· 210 commits to master since this release
9.4.0

Major changes in this release include:

  • A working makeCMD implementation
  • New generic model format for the MS models
  • Filters provided by the R API are now defined by the filters provided by the models. The listFilters() function has been added to show available filters.
  • Removal of explicit setting of filter sets in the YAML file
  • Deprecation of the Yale-Yonsei models (possibly temporary)
  • Fixed/re-enabled simCluster
  • Rewritten scatterCluster implementation
  • --noBinaries coimmand line flag (disables numerical integration over secondary mass)
  • Support for models with multiple values of Y
  • Sampling on two populations with different Y values
  • Significant performance enhancements, particularly with the noBinaries option.
  • mpiMcmc is now called singlePopMcmc
  • Both MCMC programs now default to a random seed. The --seed command line option is still available.