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Pull requests: arq5x/bedtools2

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Pull requests list

allow python from environment and missing includes on musl
#1087 opened Apr 25, 2024 by SoapGentoo Loading…
Fix minor shuffleBed option typo
#1074 opened Jan 4, 2024 by ryancey1 Loading…
1
describe bed coordinates as zero-based half-open intervals
#1070 opened Nov 7, 2023 by kloetzl Loading…
1
Minor typo fix in help
#1064 opened Sep 7, 2023 by nikhil Loading…
workaround for issue arq5x#1049
#1052 opened May 20, 2023 by hkawaji Loading…
Fix for Issue #1023
#1026 opened Nov 14, 2022 by JoeVieira Loading…
1
1
Add makewindows initial window/step feature
#936 opened Aug 7, 2021 by hisakatha Loading…
Fix an unexpected warning from makewindows
#933 opened Aug 6, 2021 by hisakatha Loading…
fix parsing headers 48105b07
#924 opened Jun 23, 2021 by kuk0 Loading…
4
Building on Windows using MSYS2
#906 opened Mar 19, 2021 by mkviatkovskii Loading…
4
Minor patches for easier porting and packaging
#895 opened Jan 24, 2021 by outpaddling Loading…
7
Fix issue #832
#847 opened Jun 5, 2020 by 38 Loading…
1
added 2 options -tn5 and -ext
#685 opened Feb 13, 2019 by lldelisle Loading…
1
Changing default behavior of BedAnnotate to preserving input lines order
#644 opened Jul 11, 2018 by borisevichdi Loading…
Mark the STL set compare operators as const.
#636 opened May 22, 2018 by yasushi-saito Loading…
Partial feature overlap with chr truncate instead of skipping
#633 opened Apr 26, 2018 by adlerpriit Loading…
1
Ditch bizarre inclusion-then-mock-out of matplotlib from sphinx
#625 opened Mar 8, 2018 by AdamWill Loading…
Remove interleaved fastq tip in bamToFastq
#360 opened Feb 10, 2016 by yesimon Loading…
Possible overflows eliminated
#251 opened Jun 2, 2015 by gtamazian Loading…
Minor fixes
#250 opened Jun 2, 2015 by gtamazian Loading…
Added innerSubtractBed, tests and Makefile incorporation
#246 opened May 28, 2015 by LukeGoodsell Loading…
Add new tool pairedBamToBED12.
#105 opened Aug 25, 2014 by mmendez12 Loading…
Fix how bamtobed -bedpe handle the last read
#101 opened Jul 31, 2014 by mmendez12 Loading…
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