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Heavy-tailed kernels reveal a finer cluster structure in t-SNE visualisations

MNIST t-SNE with different degrees of freedom

This is a companion repository to our preprint https://arxiv.org/abs/1902.05804 (Kobak, Linderman, Steinerberger, Kluger, and Berens, 2019, Heavy-tailed kernels reveal a finer cluster structure in t-SNE visualisations). All code for the paper is in a Python Jupyter notebook heavy-tailed-tsne.ipynb. We use this t-SNE implementation: https://github.com/KlugerLab/FIt-SNE, version 1.1.0.

For any technical questions, please start an Issue.

                                                      MNIST animation

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Code for the paper on t-SNE with variable degree of freedom

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  • Jupyter Notebook 99.1%
  • Python 0.9%