PROFIT-seq: Targeted and accurate whole transcriptome sequencing in a programmable manner

Programmable full-length isoform transcriptome sequencing

Author

Authors: Jinyang Zhang(zhangjinyang@biols.ac.cn), Fangqing Zhao(zhfq@biols.ac.cn)

Maintainer: Jinyang Zhang

The code is released under the MIT License. See the LICENSE file for more detail

Under submission

Please refer to the wiki for detailed usage

Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
PROFIT_seq		PROFIT_seq
app		app
misc		misc
test_data		test_data
vendor/pyssw		vendor/pyssw
.gitignore		.gitignore
LICENSE		LICENSE
Makefile		Makefile
PROFIT-seq.py		PROFIT-seq.py
RCA_adapters.fa		RCA_adapters.fa
README.md		README.md
__init__.py		__init__.py
pyproject.toml		pyproject.toml
requirements.txt		requirements.txt
step1_demultiplex.py		step1_demultiplex.py
step2_consensus.py		step2_consensus.py
step3_analysis.py		step3_analysis.py