Planktonator

Planktonator is a Python package built for detecting and measuring particles

- Outputs .tsv files ready to be imported directly into EcoTaxa

Install Package using pip

Planktonator can be installed using the pip command. It is recommended that you first setup a virtual environment. See details below.

pip install planktonator 

Usage Examples

• Measure particles and produce EcoTaxa file

Setup virtualenv:

python3 -m venv myenv

you can use any name instead of myenv

Activate virtual environment

source myenv/bin/activate

the environment can be deactivated with the deactivate command