python package updates

pip/requirements.txt

@@ -41,13 +41,13 @@ bokeh==1.4.0
 Bottleneck==1.3.2
 cachetools==3.1.1
 certifi==2019.11.28
-cffi==1.13.2
+cffi==1.14.0
 chardet==3.0.4
 Click==7.1.1
 #NO_AUTO_UPDATE: Source is defined in climate.file, changing version here is not going to get new sources
 #Looks like package version in PyPi is very old
 climate==0.4.6
-cloudpickle==1.2.2
+cloudpickle==1.3.0
 colorama==0.4.3
 configparser==4.0.2
 contextlib2==0.6.0.post1
@@ -71,7 +71,7 @@ future==0.18.2
 futures==3.3.0;python_version<'3.0'
 gast==0.3.3
 gitdb2==2.0.6
-GitPython==2.1.14 ; python_version<'3.0'
+GitPython==2.1.15 ; python_version<'3.0'
 GitPython==3.0.4 ; python_version>'3.0'
 google-common==0.0.1
 google-pasta==0.1.8
@@ -91,29 +91,29 @@ ipaddress==1.0.23
 ipykernel==4.10.1 ; python_version<'3.0'
 ipykernel==5.1.3 ; python_version>'3.0'
 ipython_genutils==0.2.0
-ipython==5.8.0 ; python_version<'3.0'
+ipython==5.9.0 ; python_version<'3.0'
 ipython==7.9.0 ; python_version>'3.0'
 ipywidgets==7.5.1
 isort==4.3.21
 jedi==0.16.0
-Jinja2==2.10.3
-joblib==0.14.0
+Jinja2==2.11.1
+joblib==0.14.1
 jsonpickle==1.3
 jsonschema==3.2.0
 jupyter_client==5.3.4
 jupyter_console==5.2.0 ; python_version<'3.0'
 jupyter_console==6.0.0 ; python_version>'3.0'
-jupyter_core==4.6.1
+jupyter_core==4.6.3
 jupyter==1.0.0
 Keras==2.3.1
 keras-applications==1.0.8
 keras-preprocessing==1.1.0
 kiwisolver==1.1.0
 lazy-object-proxy==1.4.3
-lizard==1.16.6
+lizard==1.17.3
 #NO_AUTO_UPDATE: Source is defined in llvmlite.file, changing version here is not going to get new sources
 llvmlite==0.32.0x
-lxml==4.4.1
+lxml==4.5.0
 lz4==2.2.1
 Mako==1.1.2
 Markdown==3.1.1
@@ -159,7 +159,7 @@ pathlib2==2.3.5
 pbr==5.4.4
 pexpect==4.7.0
 pickleshare==0.7.5
-pillow==6.2.1
+pillow==6.2.2
 pkgconfig==1.5.1
 plac==1.1.3
 pluggy==0.13.1
@@ -170,41 +170,41 @@ prompt_toolkit==1.0.18 ; python_version<'3.0'
 prompt_toolkit==2.0.10 ; python_version>'3.0'
 protobuf==3.10.0
 prwlock==0.4.0
-psutil==5.6.5
+psutil==5.7.0
 ptyprocess==0.6.0
-pyasn1-modules==0.2.7
-pyasn1==0.4.7
+pyasn1-modules==0.2.8
+pyasn1==0.4.8
 pybind11==2.4.3
 pybrain==0.3.3
 pycodestyle==2.5.0
 pycparser==2.20
 pycuda==2019.1.2
-pycurl==7.43.0.3
+pycurl==7.43.0.5
 pydot==1.4.1
 pyflakes==2.1.1
-Pygments==2.4.2
+Pygments==2.5.2
 pylint==1.9.5 ; python_version<'3.0'
 pylint==2.4.3 ; python_version>'3.0'
 pymongo==3.10.1
 pyOpenSSL==19.1.0
-pyparsing==2.4.5
-pyrsistent==0.15.5
+pyparsing==2.4.6
+pyrsistent==0.15.7
 py==1.8.1
 pysqlite==2.8.3; python_version<'3.0'
-pytest==4.6.6 ; python_version<'3.0'
+pytest==4.6.9 ; python_version<'3.0'
 pytest==5.2.2 ; python_version>'3.0'
 pytest-cov==2.8.1
 python-cjson==1.2.1;python_version<'3.0'
 python-dateutil==2.8.1
 python-ldap==3.2.0
 pytools==2019.1.1
 pytz==2019.3
-PyYAML==5.1.2
-pyzmq==18.1.0
+PyYAML==5.3
+pyzmq==19.0.0
 qtconsole==4.5.5
 repoze-lru==0.7
 rep==0.6.6
-requests==2.22.0
+requests==2.23.0
 root_numpy==4.8.0
 root_pandas==0.7.0;python_version<'3.0'
 rootpy==1.0.1;python_version<'3.0'
@@ -218,7 +218,7 @@ seaborn==0.9.1
 Send2Trash==1.5.0
 simplegeneric==0.8.1
 singledispatch==3.4.0.3
-six==1.13.0
+six==1.14.0
 smmap2==2.0.5
 soupsieve==1.9.5
 sqlalchemy==1.3.11
@@ -242,9 +242,9 @@ Theano==1.0.4
 thriftpy==0.3.9
 tornado==5.1.1 ; python_version<'3.0'
 tornado==6.0.3 ; python_version>'3.0'
-tqdm==4.38.0
+tqdm==4.43.0
 traitlets==4.3.3
-typed-ast==1.4.0 ; python_version>'3.0'
+typed-ast==1.4.1 ; python_version>'3.0'
 typing_extensions==3.7.4.1
 typing==3.7.4.1
 uncertainties==3.1.2