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Popular repositories

  1. cloudbreak cloudbreak Public

    The Cloudbreak Hadoop-based Genomic Structural Variation Caller

    Java 5

  2. sv-annotate sv-annotate Public

    A small pipeline to annotate and filter candidate structural variation calls

    Python 5 3

  3. permuting-feature-enrichment-test permuting-feature-enrichment-test Public

    A tool to test the enrichment of genomic features by permutations

    Python 3 1

  4. svpipeline svpipeline Public

    TeX 1

  5. project_scripts project_scripts Public

    Scripts for various projects

    R 1

  6. svfactorie svfactorie Public

    Detect genomic structural variations using conditional random fields in the Factorie framework

    Scala 1