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ecell

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ecell4 ecell4 Public

An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena

Python 17 9
ecell4_base ecell4_base Public

An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena

C++ 62 23
ecell4_docs ecell4_docs Public

The Sphinx source for https://ecell4.e-cell.org/

Jupyter Notebook 2 4

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Showing 10 of 74 repositories

ECell_Engine Public
Real-time simulation engine for biological systems

C++ 2 MIT 0 0 0 Updated Mar 26, 2024
ecell4_base Public
An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena

C++ 62 GPL-3.0 23 31 1 Updated Mar 25, 2024
ECell_Dive Public

C# 0 MIT 0 0 0 Updated Feb 10, 2024
kosmogora Public

Jupyter Notebook 0 MIT 1 4 0 Updated Oct 31, 2023
transomics2cytoscape Public
Get and integrate the pathways to create a 3D transomics network visualization

R 5 0 0 0 Updated Oct 3, 2023
bioimage_workflows Public

Python 0 2 2 3 Updated Mar 14, 2023
id2id Public

Python 0 MIT 0 10 0 Updated Jan 23, 2023
transomics2cytoscape-py Public
Automation of the transomics 2.5D network visualization

Python 0 MIT 0 0 0 Updated Dec 26, 2022
SigmoID Public Forked from kaizu/SigmoID
A Xojo/python tool for identification and annotation of transcription factor binding sites in bacterial genomes

Xojo 0 GPL-3.0 4 0 0 Updated Sep 29, 2022
transomics2cytoscape-input-datasets Public

0 0 0 0 Updated Jun 27, 2022

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