Riana (Relative Isotope Abundance Analyzer) takes in standard mass spectrometry spectra and spectral ID files, and returns mass isotopomer distributions, e.g., for protein turnover analysis.
Visit https://ed-lau.github.io/riana/ for Documentations and Usage.
Install Python 3.7+ and pip. See instructions on Python website for specific instructions for your operating system.
Riana can be installed from PyPI via pip or directly from GitHub. We recommend using a virtual environment.
$ pip install rianaLaunch riana as a module (Usage/Help):
$ python -m rianaSee the documentations for instructions to process a test data file.
Riana.py is tested in Python 3.7, 3.8, 3.9 and uses the following packages:
matplotlib==3.4.1
pandas==1.2.4
pymzml==2.4.7
tqdm==4.60.0
scikit-learn==0.24.2
Please contact us if you wish to contribute, and submit pull requests to us.
- Edward Lau, PhD - Code/design - ed-lau
See also the list of contributors who participated in this project.
This project is licensed under the MIT License - see the LICENSE.md file for details