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DistaClusters #71

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DistaClusters #71

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Commits on Nov 13, 2010

  1. Started work on distance clusters.

    @gaurav
    gaurav committed Nov 13, 2010
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  2. Some more work done.

    @gaurav
    gaurav committed Nov 13, 2010
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  3. Merge branch 'master' into clusters

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    gaurav committed Nov 13, 2010
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Commits on Dec 4, 2010

  1. Undid my attempts at using 'lib/'s. Going to avoid that for now. 

    This reverts commit e3095ff.
    @gaurav
    gaurav committed Dec 4, 2010
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  2. Added support for a simple command line interface.

    @gaurav
    gaurav committed Dec 4, 2010
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  3. Renamed simple to cli.

    @gaurav
    gaurav committed Dec 4, 2010
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  4. Added support for loading file.

    @gaurav
    gaurav committed Dec 4, 2010
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  5. We can now load files quite easily.

    @gaurav
    gaurav committed Dec 4, 2010
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Commits on Mar 30, 2011

  1. Fixed up some more DClusters stuff.

    @gaurav
    gaurav committed Mar 30, 2011
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  2. Add a new file to represent a linkage.

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    gaurav committed Mar 30, 2011
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Commits on Apr 12, 2011

  1. Merge branch 'develop' into clusters, thus updating that whole move-a… 

    …ll-code-into-src thing.

Conflicts:
	Release/SequenceMatrix/SequenceMatrix.jar
	Release/SpeciesIdentifier/SpeciesIdentifier.jar
	build.xml
	nbproject/project.xml
    @gaurav
    gaurav committed Apr 12, 2011
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  2. Lots of exciting changes, but everything's coming together really well!

    @gaurav
    gaurav committed Apr 12, 2011
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Commits on Apr 13, 2011

  1. Fixed Kathy's bug - again.

    @gaurav
    gaurav committed Apr 13, 2011
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  2. Prettied up the output, and brought SpeciesDetails into this.

    @gaurav
    gaurav committed Apr 13, 2011
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Commits on Apr 14, 2011

  1. Renamed project from 'DClusters' to 'DtClusters' to sightly improve o… 

    …ur Googlability.
    @gaurav
    gaurav committed Apr 14, 2011
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Commits on Apr 15, 2011

  1. More pottering about with stuff.

    @gaurav
    gaurav committed Apr 15, 2011
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Commits on Apr 18, 2011

  1. Started work on a new class which represented a collection of cluster… 

    …s in a distance-based tree.
    @gaurav
    gaurav committed Apr 18, 2011
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  2. Some rather complicated rewiring-with-interfaces so things "just work".

    @gaurav
    gaurav committed Apr 18, 2011
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  3. Last few bits in. ClusterNode works! But also needs testing.

    @gaurav
    gaurav committed Apr 18, 2011
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Commits on Apr 20, 2011

  1. Displaying the initial frame as buttons in a Panel.

    @gaurav
    gaurav committed Apr 20, 2011
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Commits on May 9, 2011

  1. Working on getting the rendering of our objects to work correctly.

    @gaurav
    gaurav committed May 9, 2011
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Commits on May 14, 2011

  1. Poking about a bit, but lost in the maths. Will try a simpler approach!

    @gaurav
    gaurav committed May 14, 2011
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  2. Huh. Not bad for a long night's hacking.

    @gaurav
    gaurav committed May 14, 2011
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Commits on May 15, 2011

  1. Woohoo distaclusters!

    @gaurav
    gaurav committed May 15, 2011
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Commits on Jun 8, 2011

  1. Cleaned up ClusterNode.java slightly.

    @gaurav
    gaurav committed Jun 8, 2011
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Commits on Jun 25, 2011

  1. Added up a new frame, with a snappy new user interface to play with.

    @gaurav
    gaurav committed Jun 25, 2011
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  2. Lots of new features and suchlike.

    @gaurav
    gaurav committed Jun 25, 2011
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Commits on Jun 27, 2011

  1. Created a proper deployment/release system for DtClusters.

    @gaurav
    gaurav committed Jun 27, 2011
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  2. Polished up and ready for a small demo!

    @gaurav
    gaurav committed Jun 27, 2011
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  3. New release.

    @gaurav
    gaurav committed Jun 27, 2011
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Commits on Jun 29, 2011

  1. Fixed the table so that it can't be edited (in two different ways!)

    @gaurav
    gaurav committed Jun 29, 2011
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Commits on Jul 1, 2011

  1. Created a SequencesViewer, which is currently only capable of exporti… 

    …ng sequences as FASTA.
    @gaurav
    gaurav committed Jul 1, 2011
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  2. Created a basic SequenceListVisualization which can display informati… 

    …on on sequences, allow you to sort, and export whatever you require.
    @gaurav
    gaurav committed Jul 1, 2011
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Commits on Jul 2, 2011

  1. Tried (very unsuccessfully) to reintegrate the earlier "line view" in… 

    …to the new system.
    @gaurav
    gaurav committed Jul 2, 2011
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Commits on Jul 4, 2011

  1. Incremented version number.

    @gaurav
    gaurav committed Jul 4, 2011
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  2. Midnight commit: some data massaging before getting the visualization… 

    … working.
    @gaurav
    gaurav committed Jul 4, 2011
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Commits on Jul 8, 2011

  1. Midnight commit. This RulerLayout is working, sort of, but there's a … 

    …lot more to go.
    @gaurav
    gaurav committed Jul 8, 2011
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Commits on Jul 16, 2011

  1. Midnight commit.

    @gaurav
    gaurav committed Jul 16, 2011
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Commits on Jul 27, 2011

  1. Most sophisticated layout-components system we're going to try. After… 

    … this, it's back to drawing and the drawing board.
    @gaurav
    gaurav committed Jul 27, 2011
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Commits on May 21, 2012

  1. Removed RulerLayout, new plan of action.

    @gaurav
    gaurav committed May 21, 2012
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  2. Noted down my plan so that I would remember it.

    @gaurav
    gaurav committed May 21, 2012
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Commits on Jul 5, 2012

  1. Saved newly compiled jar files and new DtClusters.bat.

    @gaurav
    gaurav committed Jul 5, 2012
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