Issues: geneontology/pipeline
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Author
Label
Projects
Milestones
Assignee
Sort
Issues list
Roll back (and then forward) "problematic" upstream files from selected resources
bug (B: affects usability)
#373
opened Apr 17, 2024 by
kltm
As pipeline(s) stabilize, increase frequency and automation
enhancement
#371
opened Apr 8, 2024 by
kltm
Add "gopreprocess" pipeline to main pipeline workflows by code review
enhancement
#370
opened Apr 4, 2024 by
kltm
incomplete file filtered_goa_uniprot_all_noiea.gpad.gz
bug (B: affects usability)
#365
opened Feb 8, 2024 by
francoiscoste
Consider (and attempt) blessing snapshots runs to "release" status
enhancement
#352
opened Jan 17, 2024 by
kltm
3 tasks
Explore getting the pipeline completing again by adjusting settings and runtime parameters
bug (B: affects usability)
#349
opened Dec 12, 2023 by
kltm
Can no longer upload to Zenodo; due to recent Zenodo update?
bug (A: showstopper)
#345
opened Nov 18, 2023 by
kltm
WormBase upstream having issues; use bypass and revert when ready
bug (B: affects usability)
#338
opened Sep 25, 2023 by
kltm
Switch noctua-models GitHub checkout to be the same as the ontology checkout
#335
opened Aug 30, 2023 by
kltm
Add remainder mouse annotation file from uniprot upstreams to MGI data stream
enhancement
#329
opened Jun 1, 2023 by
kltm
BOOKKEEPING: Retained for holding on to confinement-325 files until the MGI imports are done.
enhancement
#325
opened Jun 1, 2023 by
kltm
Experiment: try and load AmiGO (and reason) within a single ontology
enhancement
#323
opened Mar 31, 2023 by
kltm
Update GORULE:0000029 (IEA life) to start filtering at three (3) years
bug (B: affects usability)
#317
opened Feb 21, 2023 by
kltm
4 tasks done
In some cases, the pipeline fails due to container not stopping fast enough
blocked/upstream
bug (B: affects usability)
#316
opened Feb 15, 2023 by
kltm
Proteoform annotations are missing from the mouse gaf
bug (B: affects usability)
#313
opened Jan 31, 2023 by
ukemi
Add stats for number of genes per MOD for which IBAs get dropped on the floor
#300
opened Sep 21, 2022 by
cmungall
Revert changes for pinned CL version once CL is fixed
bug (B: affects usability)
#291
opened Jun 16, 2022 by
kltm
Previous Next
ProTip!
Add no:assignee to see everything that’s not assigned.