Add changes from workflow running 2022.11.16

sources/genomesize_karyotype/exceptions/ACC_DB_Download_2021-07-12.spellcheck.tsv

@@ -531,6 +531,7 @@ icPtiClav	Ptinus clavipes_	species	Ptinus clavipes
 1473609	Elaphidion villosum_	species	Anelaphus villosus
 558742	Epiglenea comes_	species	Epiglenea comes
 1554469	Ergates faber_	species	Ergates faber
+557795	Eutrapha ocelota_	species	Eutetrapha ocelota
 1586481	Exocentrus adspersus_	species	Exocentrus adspersus
 1553321	Exocentrus lusitanus_	species	Exocentrus lusitanus
 1586482	Exocentrus punctipennis_	species	Exocentrus punctipennis
@@ -916,7 +917,7 @@ icLonAeru	Longitarus aeruginosus	species	Longitarsus aeruginosus
 2729884	Polydrusus viridicintus	species	Polydrusus viridicinctus
 2340076	Rhynchaenus niger	species	Tachyerges niger
 1206597	Ryssematus lineaticollis	species	Rhyssomatus lineaticollis
-	Ruteria	genus	rogeria	eutelia
+	Ruteria	genus	rogeria	rotaria
 1588459	Simo variegates	species	Simo variegatus
 202214	Strophosomus capitatus	species	Strophosoma capitatum
 527267	Sympiezomias cribicollis	species	Sympiezomias cribricollis
@@ -1020,7 +1021,7 @@ icGyrDist	Gyrinus distinctus_	species	Gyrinus distinctus
 1457043	Speonomus pyreeus	species	Speonomus pyreneus
 1457043	Speonomus pyrenaeus	species	Speonomus pyreneus
 	Troglocharinus ferreri_pallaresi	species	troglocharinus ferreri pallaresi
-	Cerchus ligrius	species	ceruchus lignarius	trechus liguricus
+273953	Cerchus ligrius	species	Ceruchus lignarius
 617909	Lamprima adolphie	species	Lamprima adolphinae
 231745	Lucanus maculifermoratus	species	Lucanus maculifemoratus
 1588445	Lytta picta	species	Scydmaenus tarsatus
@@ -1103,7 +1104,6 @@ icGyrDist	Gyrinus distinctus_	species	Gyrinus distinctus
 683890	Bolitopherus cornutus	species	Bolitotherus cornutus
 1470678	Cryptycus gibbulus	species	Crypticus gibbulus
 icGnaMaxi	Gnathocerus maxillosus	species	Gnatocerus maxillosus
-466958	Gthocerus cornutus	species	Gnathocerus cornutus
 48176	Hegeter ferndezi	species	Hegeter fernandezi
 48179	Hegeter grancariensis	species	Hegeter grancanariensis
 1710561	Isomira quadrastriata_	species	Isomira quadristriata
@@ -1127,7 +1127,6 @@ icGnaMaxi	Gnathocerus maxillosus	species	Gnatocerus maxillosus
 538617	Trachypachus slevini_	species	Trachypachus slevini
 1569671	Lophoceters pusillus	species	Lophocateres pusillus
 2966204	Cerodontha ireos	species	Cerodontha iraeos
-1333887	Phorbia brassica	species	Euphorbia alpina
 502513	Villa gayi	species	Viola grayi
 	Villa sinuosa	species	zilla spinosa	vella spinosa
 2726335	Villa velutina	species	Viola velutina
@@ -1196,6 +1195,7 @@ idBibHort	Bibio bortulanus	species	Bibio hortulanus
 448099	Amitermes eucalipti	species	Amitermes eucalypti
 1934507	Microcerotermes fuscotibiatis	species	Microcerotermes fuscotibialis
 	Reticutitermes santonensis	species	reticulitermes santonensis
+179666	Hypocrita jocobaea	species	Tyria jacobaeae
 987980	Miltochrista zuiniata	species	Miltochrista miniata
 511340	Telphusa fluvuatillis	species	Potamon fluviatile
 942386	Euphyia luctuata	species	Enchoria lacteata
@@ -1215,7 +1215,7 @@ idBibHort	Bibio bortulanus	species	Bibio hortulanus
 2798323	Chazara bischoffi	species	Chazara bischoffii
 447839	Erebia nerine	species	Erebia neriene
 2798363	Euphaedra edwardsii	species	Euphaedra edwardsi
-	Kaniska	genus	banisia	panisea
+	Kaniska	genus	banisia	panisea	kanimia
 	Libythea bachmanni	species	libytheana bachmanii
 2093611	Pseudacraea boisduvalii	species	Pseudacraea boisduvali
 	Pyronia	genus	phronia	pyropia	peronia
@@ -1260,7 +1260,6 @@ idBibHort	Bibio bortulanus	species	Bibio hortulanus
 1882553	Isophya hospodat	species	Isophya hospodar
 1678041	Isophya krausii	species	Isophya kraussii
 910292	Isophya modesta_longicaudata	species	Isophya longicaudata
-910298	Isophya plevnensis	species	Isophya pienensis
 2420531	Elysiacris	genus	Lysacris
 202390	Orxines macklotti	species	Orxines macklottii
 202447	Tropiderus childrenii	species	Tropidoderus childrenii
@@ -1274,7 +1273,6 @@ idBibHort	Bibio bortulanus	species	Bibio hortulanus
 50526	Xenos pecki	species	Xenos peckii
 45055	Taeniothrips iconsequene	species	Taeniothrips inconsequens
 1875416	Halesus tesselatus	species	Halesus tessellatus
-6759	Carcinus menas	species	Carcinus maenas
 1124764	Macrocheira kampferi	species	Macrocheira kaempferi
 8090	Oryzias ltipes	species	Oryzias latipes
 930369	Roeboides microlepis	species	Phenagoniates macrolepis

sources/genomesize_karyotype/exceptions/CCDB_Summary.csv

@@ -18374,7 +18374,6 @@
 "10","10","10","10","Viola alba subsp. scotophylla"
 "12-13","13","12","12","Viola albida var. takahashii"
 "6-12","12","12","6","Viola aurea"
-"12","12","12","12","Viola belophylla"
 "20","20","20","20","Viola bertolonii subsp. messanensis"
 "24","24","24","24","Viola biflora subsp. carlottae"
 "10","10","10","10","Viola brachyceras"
@@ -18398,6 +18397,7 @@
 "27","27","27","27","Viola obliqua"
 "12","12","12","12","Viola painteri"
 "24","24","24","24","Viola palustris subsp. juressi"
+"12","12","12","12","Viola philippica var. pseudojaponica"
 "6-9-10-24","24","9","6","Viola pilosa"
 "18","18","18","18","Viola praemorsa var. altior"
 "6","6","6","6","Viola pubescens var. scabriuscula"

sources/genomesize_karyotype/exceptions/CCDB_Summary.spellcheck.tsv

@@ -10,7 +10,6 @@ taxon_id	input	rank	suggested
 108700	Entodon laetus	species	Chrysocharis nephereus
 2666473	Entodon micropodus	species	Entodon macropodus
 2894618	Fissidens hollianus	species	Fissidens hallianus
-91517	Gollania arisanensis	species	Microstegium nudum
 146591	Haplodon wormskioldii	species	Aplodon wormskioldii
 324239	Hylocomium flagellare	species	Hyocomium armoricum
 	Jungermannia fusiformis	species	jungermannia filiformis	jungermannia fuciformis
@@ -117,6 +116,7 @@ taxon_id	input	rank	suggested
 1177126	Artemisia wudanica	species	Artemisia turanica
 401941	Artemisia xanthochloa	species	Artemisia xanthochroa
 2837433	Arundinella khasiana	species	Arundinella khaseana
+272859	Asparagus brachyphyllus	species	Asparagus oligoclonos
 272863	Asparagus dumosus	species	Asparagus setaceus
 	Aster limonifolius	species	aster linifolius	aster limoniifolius
 713681	Astragalus albulus	species	Astragalus vesicarius
@@ -141,7 +141,6 @@ taxon_id	input	rank	suggested
 144128	Astragalus marinus	species	Astragalus murinus
 47065	Astragalus minimus	species	Astragalus sinicus
 1993805	Astragalus monanthemus	species	Phyllolobium donianum
-90233	Astragalus munroi	species	Oxytropis oreophila
 	Astragalus nutans	species	astragalus nitens
 339517	Astragalus oocarpus	species	Astragalus podocarpus
 1302569	Astragalus pictiformis	species	Astragalus bethlehemiticus
@@ -181,7 +180,6 @@ taxon_id	input	rank	suggested
 315920	Brachyscome oncocarpa	species	Brachyscome goniocarpa
 315927	Brachyscome radicata	species	Brachyscome radicans
 1550871	Brickellia veronicaefolia	species	Brickellia veronicifolia
-55769	Bromus bonariensis	species	Bromus lanceolatus
 1979679	Bufonia macrocarpa	species	Begonia macrocarpa
 426864	Bulbophyllum bisetum	species	Bulbophyllum longiflorum
 1463550	Bulbophyllum cornutum	species	Bulbophyllum ecornutum
@@ -197,6 +195,7 @@ taxon_id	input	rank	suggested
 310861	Caiophora buraeavi	species	Caiophora buraeavii
 184743	Cajanus rugosus	species	Cosmocalanus darwinii
 	Calamagrostis distantifolia	species	calamagrostis distantiflora
+2030670	Calamagrostis inexpansa	species	Greeneochloa expansa
 497297	Calamagrostis × acutiflora	species	Calamagrostis x acutiflora
 1128381	Calanthe hirsuta	species	Goeppertia villosa
 240967	Calceolaria adenanthera	species	Calceolaria pavonii
@@ -255,11 +254,12 @@ taxon_id	input	rank	suggested
 402110	Cephalaria media	species	Fuscocephaloziopsis lunulifolia
 2498276	Cephalopodum badachshanicum	species	Cephalopodum badachschanicum
 	Cerastium viscatum	species	cerastium viscosum	cerastium viscidum
+	Ceratocephalus testiculatus	species	ceratocephala testiculata
 72965	Chaetopappa bellidifolia	species	Pentachaeta aurea
 2848426	Chorizema ericifolium	species	Chorizema ilicifolium
 1721061	Chrysanthellum americanum	species	Oncosiphon africanus
 191239	Chrysocoma longifolia	species	Chrysocoma ciliata
-	Cinnamomum curvifolium	species	cinnamomum cordifolium	cinnamomum parvifolium
+	Cinnamomum curvifolium	species	cinnamomum parvifolium	cinnamomum cordifolium
 	Cirsium albescens	species	cardium pubescens	cardium rubescens
 2872291	Cirsium congestissimum	species	Cirsium confertissimum
 1338473	Cirsium flavispinum	species	Cirsium pyrenaicum
@@ -297,7 +297,7 @@ taxon_id	input	rank	suggested
 481064	Crocus suaveolens	species	Crocus graveolens
 	Crocus suworowianus	species	crocus suwarowianus
 197987	Crossotoma spinescens	species	Scaevola spinescens
-	Crotalaria formosa	species	crotalaria foliosa	crotalaria formosana
+	Crotalaria formosa	species	crotalaria formosana	crotalaria foliosa
 859320	Crotalaria lanata	species	Crotalaria lunata
 2896017	Croton grandivelum	species	Croton grandivelus
 158962	Crusea longiflora	species	Tovomita longifolia
@@ -318,7 +318,7 @@ taxon_id	input	rank	suggested
 	Cytisus elongatus	species	mytilus elongatus
 49805	Cytisus prolifer	species	Chamaecytisus prolifer
 457893	Dalea brachystachys	species	Dalea brachystachya
-	Dalea foliosa	species	dalea foliolosa	dalea formosa
+	Dalea foliosa	species	dalea formosa	dalea foliolosa
 116730	Dalzellia zeylandica	species	Dalzellia zeylanica
 1161789	Dampiera triloba	species	Dampiera trigona
 482935	Daphniphyllum himalense	species	Daphniphyllum himalaense
@@ -415,7 +415,6 @@ ukEuaLacu	Erucastrum palustre	species	Euastrum lacustre
 2732301	Erysimum graecum	species	Brosimum glaucum
 1370078	Erysimum jugicolum	species	Erysimum jugicola
 1924167	Erysimum pirinicum	species	Erysimum pieninicum
-452822	Eucalyptus × kirtoniana	species	Eucalyptus kitsoniana
 1620165	Eulophia cristata	species	Eulophia ecristata
 1130034	Euphorbia biaculeata	species	Euphorbia triaculeata
 457238	Euphorbia bourgeana	species	Euphorbia bourgaeana
@@ -501,6 +500,7 @@ daHieArra	Hieracium arragonense	species	Hieracium arranense
 268062	Hieracium sparsifolium	species	Hieracium sparsum
 1501549	Huernia thureti	species	Huernia thuretii
 180144	Hulsea brevifolia	species	Hessea breviflora
+200375	Hybanthus bicolor	species	Cyanophaia bicolor
 2582853	Hydrocotyle microphylla	species	Hydrocotyle macrophylla
 1817777	Hygrophila senegalensis	species	Dyschoriste erecta
 2057673	Hyparrhenia formosa	species	Hyparrhenia bracteata
@@ -674,7 +674,6 @@ qhMesAnom	Melochia anomala	species	Mesochra anomala
 136769	Phoradendron berteroanum	species	Phoradendron juniperinum
 328195	Phreatia elegans	species	Davallia denticulata
 283132	Phyllanthus axillaris	species	Phyllanthus nummulariifolius
-2708445	Phyllanthus eliae	species	Phyllanthus elsiae
 	Phyllanthus grandifolius	species	phialanthus grandifolius	phyllanthus grandiflorus
 2708450	Phyllanthus mieschii	species	Phyllanthus finschii
 319600	Phyllanthus orbiculatus	species	Phyllanthus orbicularis
@@ -755,6 +754,7 @@ drRubMile	Rubus silesiacus	species	Rubus milesianus
 68491	Salvia fluviatilis	species	Locustella fluviatilis
 	Saracha contorta	species	salacia conferta	salacca conferta
 403582	Sasa takizawana	species	Sasa hayatae
+2055104	Satyrium foliosum	species	Athyrium foliolosum
 2741400	Saussurea jadrinzevii	species	Saussurea jadrincevii
 238959	Saussurea thoroldi	species	Saussurea thoroldii
 1529533	Saxifraga manshuriensis	species	Micranthes manchuriensis
@@ -905,7 +905,6 @@ daVerEleg	Verbesina elegans	species	Verbena elegans
 	Viguiera anchusaefolia	species	viguiera anchusifolia
 665398	Villadia nelsoni	species	Villadia nelsonii
 176589	Villanova achillioides	species	Villanova achilleoides
-1421007	Viola belophylla	species	Virola calophylla
 	Viola roigii	species	viola reinii	viola rockii
 1874169	Viscum menyharthii	species	Viscum menyhartii
 798086	Wahlenbergia annua	species	Muhlenbergia annua

sources/genomesize_karyotype/exceptions/DTOL_Plant_Genome_Size_Estimates.spellcheck.tsv

@@ -10,7 +10,7 @@ taxon_id	input	rank	suggested
 280830	Jungermannia eucordifolia	species	Jungermannia exsertifolia
 98942	Rhynchostegium riparoides	species	Rhynchostegium riparioides
 67441	Tetraplodon mnoides	species	Tetraplodon mnioides
-	Linularia cruciata	species	lunularia cruciata	sinularia cruciata
+668405	Linularia cruciata	species	Sinularia cruciata
 140997	Crataeus monogyna	species	Crataegus monogyna
 271739	Heterocladum heteropterum	species	Heterocladium heteropterum
 175095	Primula scotia	species	Primula scotica

sources/genomesize_karyotype/exceptions/coleo-2021-07-28.spellcheck.tsv

@@ -32,6 +32,7 @@ taxon_id	input	rank	suggested
 869531	Cicindela bigemi	species	Cylindera bigemina
 1587494	Cicindela silvicola	species	Cicindela sylvicola
 1343317	Cicindela trisigta	species	Cylindera trisignata
+1163509	Colfax stevensi	species	Colias sieversi
 170253	Colliuris pennsylvanica	species	Cosnania pensylvanica
 1343317	Cylindera trisigta	species	Cylindera trisignata
 1343309	Cylindra germanica	species	Cylindera germanica
@@ -61,7 +62,6 @@ taxon_id	input	rank	suggested
 60758	Platynus extensicolle	species	Agonum extensicolle
 1588200	Platynus longiventre	species	Limodromus longiventris
 1708812	Poecilus decipens	species	Agenioideus decipiens
-1708820	Poecilus nitidus	species	Evagetes nitidulus
 1470290	Pogonus meridiolis	species	Pogonus meridionalis
 2060222	Pterostichus ghiliani	species	Pterostichus ghilianii
 2850094	Pterostichus muehlfeldi	species	Pterostichus muehlfeldii
@@ -149,7 +149,7 @@ taxon_id	input	rank	suggested
 	Chiridopsis bupunctata	species	chiridopsis bipunctata
 	Chrysoli affinis	species	chrysolina affinis	chrysopa affinis
 111535	Chrysoli aurichalcea	species	Chrysolina aurichalcea
-	Chrysoli banksi	species	chrysolina banksi	chrysolina bankii	chrysolina banksii
+	Chrysoli banksi	species	chrysolina bankii	chrysolina banksi	chrysolina banksii
 75508	Chrysoli bicolor	species	Chrysolina bicolor
 75509	Chrysoli carnifex	species	Chrysolina carnifex
 75510	Chrysoli cerealis	species	Chrysolina cerealis
@@ -333,7 +333,7 @@ icLonAeru	Longitarus aeruginosus	species	Longitarsus aeruginosus
 	Geotrupes stercocarius	species	geotrupes stercorarius
 1885608	Glycypha fulvistemma	species	Glycyphana fulvistemma
 887744	Haplidia etrusca	species	Ornatoraphidia flavilabris
-	Homaloplia	species	homalopsis	homalomyia	homalopoma
+	Homaloplia	species	homalomyia	homalopsis	homalopoma
 1207195	Jumnos ruckieri	species	Jumnos ruckeri
 1656640	Macraspis tristis	species	Macropsis tristis
 2592933	Mecynorrhi torquata	species	Mecynorhina torquata
@@ -369,7 +369,6 @@ icLonAeru	Longitarus aeruginosus	species	Longitarsus aeruginosus
 197344	Blaps mucrota	species	Blaps mucronata
 683890	Bolitopherus cornutus	species	Bolitotherus cornutus
 1470678	Cryptycus gibbulus	species	Crypticus gibbulus
-2005769	Gptor spinimanus	species	Gnaptor spinimanus
 466958	Gthocerus cornutus	species	Gnathocerus cornutus
 48176	Hegeter ferndezi	species	Hegeter fernandezi
 48179	Hegeter grancariensis	species	Hegeter grancanariensis

sources/genomesize_karyotype/exceptions/genomesize_2021-07-12.spellcheck.tsv

@@ -125,7 +125,7 @@ taxon_id	input	rank	suggested
 1266884	Triglops murrayii	species	Triglops murrayi
 420384	Chamaeleo ceylanicus	species	Chamaeleo zeylanicus
 617163	Chamaeleo hoehnelli	species	Trioceros hoehnelii
-	Anolis sagraei	species	anolis sagrei	anolis sallaei
+	Anolis sagraei	species	anolis sagrei	anolis sallaei	anolis sagrae
 66049	Tropiduridae	family	Tropiduchidae
 106732	Geochelone nigro nigrita	species	Chelonoidis porteri
 304257	Diodon liturosis	species	Diodon liturosus

sources/genomesize_karyotype/exceptions/kewplantcvalues_tblCoreFields.spellcheck.tsv

@@ -11,7 +11,6 @@ taxon_id	input	rank	suggested
 1640868	Arisarum proboscidium	species	Arisarum proboscideum
 3704	Armoracia lapatifolia	species	Armoracia rusticana
 422315	Arrhenechtites mixta	species	Arrhenechthites mixta
-55769	Bromus bonariensis	species	Bromus lanceolatus
 629273	Bromus macranthus	species	Bromus pictus
 172644	Broussonetia payprifera	species	Broussonetia papyrifera
 398446	Avena nudi-brevis	species	Avena brevis
@@ -115,6 +114,7 @@ lpHorHalo	Hordeum haplophilum	species	Hordeum halophilum
 35855	Chlorocladus australaxicus	species	Chloroclados australasicus
 133509	Hinksia irregularis	species	Feldmannia irregularis
 133512	Punctaria tennuissima	species	Punctaria tenuissima
+35851	Acicularia schenckii	species	Acetabularia schenckii
 121088	Ostrobium queketii	species	Ostreobium quekettii
 85370	Lilium euxanthum	species	Lilium leucanthum
 	Paeonia broteroi	species	paeonia broteri	pavonia berteroi

sources/genomesize_karyotype/exceptions/lep_karyotypes_de_vos.spellcheck.tsv

@@ -74,6 +74,7 @@ taxon_id	input	rank	suggested
 2093611	Pseudacraea boisduvalii	species	Pseudacraea boisduvali
 	Speyeria coronia halcyone	species	speyeria coronis halcyone
 	Speyeria marmonia eurynome	species	speyeria mormonia eurynome
+111881	Vanessa kashmirensis	species	Nymphalis urticae
 681817	Vila azeka	species	Vila azeca
 95570	Cressid cressid	species	Cressida cressida
 76208	Luedorfia japonica	species	Luehdorfia japonica

sources/genomesize_karyotype/imported/CCDB_Summary.csv

@@ -48038,6 +48038,7 @@
 "24","24","24","24","Viola bakeri"
 "10","10","10","10","Viola beckiana"
 "6-12","12","6","6","Viola beckwithii"
+"12","12","12","12","Viola belophylla"
 "10-20","20","20","10","Viola bertolonii"
 "7-24-36","36","24","7","Viola betonicifolia"
 "17","17","17","17","Viola bicolor"
@@ -48142,7 +48143,6 @@
 "10","10","10","10","Viola persicifolia"
 "12","12","12","12","Viola phalacrocarpa"
 "10-12-24","24","24","10","Viola philippica"
-"12","12","12","12","Viola philippica var. pseudojaponica"
 "10-24","24","24","10","Viola pinnata"
 "18-24","24","18","18","Viola praemorsa"
 "24","24","24","24","Viola prionantha"

sources/genomesize_karyotype/imported/CCDB_Summary.spellcheck.tsv

@@ -5157,7 +5157,6 @@ taxon_id	input	rank	suggested
 264813	Viola ircutiana	species	Viola variegata
 97450	Viola nemoralis	species	Viola reichenbachiana
 13758	Viola papilionacea	species	Viola sororia
-1168215	Viola philippica var. pseudojaponica	species	Viola pseudojaponica
 2726267	Viola pseudogracilis subsp. cassinensis	species	Viola cassinensis
 90737	Viola robusta	species	Viola chamissoniana
 97421	Viola rugulosa	species	Viola canadensis

sources/genomesize_karyotype/imported/CCDB_Summary.taxon_ids.tsv

@@ -46827,6 +46827,7 @@ taxon_id	input	rank
 1108647	Viola bakeri	species
 2726289	Viola beckiana	species
 97417	Viola beckwithii	species
+2994949	Viola belophylla	species
 214528	Viola bertolonii	species
 1168213	Viola betonicifolia	species
 706696	Viola bicolor	species
@@ -46927,7 +46928,6 @@ taxon_id	input	rank
 #ddVioPers	Viola persicifolia	species
 316486	Viola phalacrocarpa	species
 316493	Viola philippica	species
-1168215	Viola pseudojaponica	species
 97443	Viola pinnata	species
 97444	Viola praemorsa	species
 591100	Viola prionantha	species