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  1. gigadb-website gigadb-website Public

    Source code for running GigaDB

    PHP 8 13

Repositories

Showing 10 of 51 repositories
  • gigadb-website Public

    Source code for running GigaDB

    PHP 8 GPL-3.0 13 797 (2 issues need help) 57 Updated May 9, 2024
  • techteam Public
    Ruby 0 LGPL-3.0 2 0 1 Updated Mar 19, 2024
  • galaxy-allpaths Public

    A Galaxy wrapper to return bacterial genome assemblies made by ALL-PATHS presented in Luo et al., (2012) SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. GigaScience 2012, 1:18

    0 GPL-3.0 1 0 0 Updated Dec 24, 2023
  • paper-luo2012 Public

    Genome assembly pipelines from Luo et al., (2012) SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. GigaScience 1:18

    Perl 0 GPL-3.0 2 0 0 Updated Dec 24, 2023
  • Wing_Biometrics_2015 Public Forked from DworkinLab/Wing_Biometrics_2015

    Source code from Sonnenschein et al., (2015) An image database of Drosophila melanogaster wings for phenomic and biometric analysis. GigaScience 4:25

    R 0 5 0 0 Updated Dec 24, 2023
  • SOAPdenovo2 Public Forked from aquaskyline/SOAPdenovo2

    Source code for SOAPdenovo2 from Luo et al., (2012) SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. GigaScience 1:18

    C 0 GPL-3.0 78 0 0 Updated Dec 24, 2023
  • smilefinder Public Forked from wilfriedguiblet/smilefinder

    Source code from Guiblet et al., (2014) SmileFinder: a resampling-based approach to evaluate signatures of selection from genome-wide sets of matching allele frequency data in two or more diploid populations. GigaScience 2015, 4:1

    Python 0 3 0 0 Updated Dec 24, 2023
  • paper-alnasir2015 Public

    Source code from Al-Nasir and Shanahan, (2015) Investigation into the annotation of protocol sequencing steps in the Sequence Read Archive. GigaScience 4:23

    0 LGPL-3.0 1 0 0 Updated Dec 22, 2023
  • gage Public

    An archive of the code used for evaluating assemblies from GAGE.

    Java 0 1 0 0 Updated Dec 22, 2023
  • bgi-soap2 Public

    Source code and binaries for the SOAP2 alignment tool developed by BGI.

    C 7 5 0 0 Updated Dec 22, 2023

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