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26 followers · 10 following

Achievements

Achievement: StarstruckAchievement: Pair ExtraordinaireAchievement: Pull Sharkx3Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor
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Achievements

Achievement: StarstruckAchievement: Pair ExtraordinaireAchievement: Pull Sharkx3Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor
BetaSend feedback

Highlights

  • Pro

Organizations

@GenomicResources
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Pinned

  1. exfi exfi Public

    Get exons from a transcriptome and raw genomic reads using abyss-bloom and bedtools

    Python 3 1

  2. smsk smsk Public template

    Snakemake skeleton - Build workflows with Snakemake

    Python 16 6

  3. smsk_khmer_trinity smsk_khmer_trinity Public

    Transcriptome assembly via digital normalization with khmer and Trinity

    Python 4 2

  4. smsk_annotate smsk_annotate Public

    Pipeline to annotate a transcriptome assembly, coding and noncoding parts.

    R 1 1

  5. smsk_selection smsk_selection Public

    Snakemake project to predict orthogroups and find patterns of postive selection with orthofinder and fastcodeml

    C++ 5 2

  6. smsk_trinotate smsk_trinotate Public

    Snakemake workflow to run transdecoder + trinotate

    Python 8 2