Scripts for processing bioinformatics data
Reads from some CSV files and makes a bunch of residual plots The most important step is resolving the different indices.
The data should be in a comma separated values file. In the following format. It can be exported from Excel. experimental_times, experimental_data,blank,time(secs),time(mins),model_data
The filenames are significant as the information for titling the plots is extracted from the filename.
data.Cathep.Cathep.substrate.csv
where there can be as many Cathep entries as you want.
Go to your nearest terminal and type
python -i plotter data.*
The data.* is a wildcard that passes in all files that start with data. to the program.
If you want to see residual plots you can use the command flag -r like
python -i plotter -r data.*
For verbose progress statements you can use --verbose
python -i plotter --verbose data.*
These can be combined.