This repository has been archived by the owner on Sep 22, 2020. It is now read-only.
Adding org subcommand to suite
org allows you to take a folder with sequencing data fresh from bcl2fastq and organize your data into a human-understandable structure, complete with Snakefile and README templates. Also renames FASTQ files into simpler, more standardized format (_-separated in the filename), with a config.tsv table that keeps track of the relevant information