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  1. sigfit sigfit Public

    Flexible Bayesian inference of mutational signatures

    R 33 8

  2. TransmissibleCancerGroup/Mixed TransmissibleCancerGroup/Mixed Public

    Repo of simple scripts used by TCG

    C++ 1

  3. treeCl treeCl Public

    Clustering phylogenetic trees with python

    C++ 24 12

  4. phylo_utils phylo_utils Public

    Likelihood calculation utilities - pruning algorithm, phylogenetic models...

    Python

  5. tree_distance tree_distance Public

    Implementation of geodesic, Robinson-Foulds and Euclidean tree distance metrics

    C++ 3 1

  6. evolsim evolsim Public

    Student evolution paper exercise

    Go