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101 followers · 26 following
  • Massachusetts General Hospital/Broad Institute
  • US

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Achievement: Public SponsorAchievement: Pull Sharkx2Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Starstruck
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Achievements

Achievement: Public SponsorAchievement: Pull Sharkx2Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Starstruck
BetaSend feedback

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  • Pro

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@CSB5
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lch14forever/README.md

Hi πŸ‘‹, I'm Chenhao Li (ζŽι™ˆζ΅©)

GIF

Github | Twitter | Google Scholar | ORCID

  • πŸ” A postdoc at Massachusetts General Hospital and Broad Institute

  • πŸ§‘πŸ»β€πŸ’» A computational biologist working with high-throughput sequencing data

  • 🧫 Study the gut microbiome and its interactions with the host

  • ❓ Interested in the uncharacterized functional space of the gut microbes

  • ❓ Interested in the spatial-temporal dynamics of the gut microbes

Pinned

  1. microbiomeViz microbiomeViz Public

    Visualize microbiome data with black magic ggtree

    R 67 14

  2. beem-static beem-static Public

    πŸ“¦BEEM-Static: An R package for inferring microbial interactions based on Lotka-Volterra models

    R 8 8

  3. hospital_microbiome hospital_microbiome Public

    HTML 2 9

  4. shotgunmetagenomics-nf shotgunmetagenomics-nf Public

    Python 3 5

  5. CSB5/INC-Seq CSB5/INC-Seq Public

    INC-Seq: Accurate single molecule reads using nanopore sequencing

    Python 13 4

  6. BEEM BEEM Public

    BEEM: Estimating Lotka-Volterra models from time-course microbiome sequencing data

    R 3 5