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Remove global php path variables in favor of constants for path confi…
…guration. These may be configured through the webserver. The 'core' and 'classes' paths are now hardcoded under the directory specified by APPLICATION_PATH. These directories are deprecated and will be removed once the entire application has been refactored. Configuration files have been moved out of webroot. Use the correct path. Update autoload to load from the legacy core directory first, then the application directory. Account for namespacing in the application directory.
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