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Pinned

  1. morinlab/FFPolish morinlab/FFPolish Public

    Python 2 4

  2. cidgoh/ontotrek cidgoh/ontotrek Public

    A 3d ontology visualizer focusing on OBOFoundry.org ontologies

    JavaScript 5

  3. WGS-TB/NGSweep WGS-TB/NGSweep Public

    Matthew's pipeline for preprocessing NGS data

    Python

  4. WGS-TB/PathOGiST WGS-TB/PathOGiST Public

    This repository contains the pipeline for the multi-criterion genomic analysis of bacterial pathogens

    Python 1

  5. rdmorin/mutation_rainstorm rdmorin/mutation_rainstorm Public

    Compute points for a cohort-wide variation on rainfall plots ("rainstorms") and identify mutation peaks

    R 8 4

  6. cidgoh/nf-seqqc cidgoh/nf-seqqc Public

    Bacterial Genomics workflow for short(Illumina) and long-read (Oxford Nanopore) sequencing data

    Nextflow 2 2