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1. matsengrp/epam matsengrp/epam Public

   Evaluating predictions of affinity maturation

   Python 1

2. Growth-expression-translation Growth-expression-translation Public

   Forked from adamhockenberry/Growth-expression-translation

   Explore the relationship between codon usage bias (CUB), gene expression, and growth rate in microbes (Johnson et al., 2023)

   HTML

3. amino-acid-distributions amino-acid-distributions Public

   Fit site-specific amino acid distributions (Johnson and Wilke, 2020)

4. genotype-alignment-information genotype-alignment-information Public

   Analysis of simulated genotype alignment data for use in CNN estimators (Johnson and Wilke, 2022)

   R 2

5. popgencnn popgencnn Public

   R package for population genetic inference with CNNs

   R 1

6. FredHutchScienceEducation/CodingforCancer-Rmd FredHutchScienceEducation/CodingforCancer-Rmd Public

   Lesson material for the Coding for Cancer Program at the Fred Hutch Cancer Center.

   1