Pinned

1. amino-acid-distributions amino-acid-distributions Public

   Fit site-specific amino acid distributions (Johnson and Wilke, 2020)

2. genotype-alignment-information genotype-alignment-information Public

   Analysis of simulated genotype alignment data for use in CNN estimators (Johnson and Wilke, 2022)

   R 1

3. Growth-expression-translation Growth-expression-translation Public

   Forked from adamhockenberry/Growth-expression-translation

   Explore the relationship between codon usage bias (CUB), gene expression, and growth rate in microbes (Johnson et al., 2023)

   HTML

4. popgencnn popgencnn Public

   R package for population genetic inference with CNNs

   R 1

5. mmjohn.github.io mmjohn.github.io Public

   Personal website

   HTML