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Feat/metapopulation model #259

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Feat/metapopulation model #259

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giovannic
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giovannic and others added 16 commits July 18, 2023 12:11
 * Add rdt testing parameters
 * Update biting_process to consider rdt testing for mixing
- updating metapop vignette
- clarifying row & col meanings
 * Add rdt testing parameters
 * Update biting_process to consider rdt testing for mixing
 * refactor transmission mixing code
 * fix regressions
 * add time caching
 * Added export_mixing and import_mixing arguments to run_metapop_...
 * Update create_transmission_mixer to mix eir on import and foim on
   export
 * Fix regression tests
Add asymmetric transmission in mixing:
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