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28 Open 85 Closed
28 Open 85 Closed
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Issues list

Calculating cumulative incidence of deterministic continuous model in odin.dust for use in mcstate
#240 opened Mar 1, 2024 by nputney4
Smoothing Distribution from IF2
#239 opened Feb 15, 2024 by mshafq
1
output conditional log likelihood and number of resampled particles in filter
#224 opened Nov 29, 2022 by lwhittles
Integrate adaptive proposal for the multi-region MCMC
#212 opened Jun 16, 2022 by MJomaba
Speculative mcmc
#207 opened Apr 11, 2022 by richfitz
Fitting a model to multiple variant waves with cycling of strains
#202 opened Feb 22, 2022 by LloydChapman
1
update DESCRIPTION
#200 opened Jan 31, 2022 by richfitz
Replace progress with cli
#199 opened Jan 28, 2022 by richfitz
pmcmc's initial argument should have no default and move ahead of initial
#190 opened Jan 17, 2022 by richfitz
Add support for computing covariance matrices etc into the package
#189 opened Jan 14, 2022 by richfitz
Add example on fixing user() params to docs
#184 opened Jan 11, 2022 by johnlees
Confirm nested behaviour with staggered data
#182 opened Jan 7, 2022 by richfitz
Check that particle filter data is still valid after subsetting
#180 opened Jan 6, 2022 by richfitz
Check that pmcmc initial parameters are in range
#175 opened Jan 5, 2022 by richfitz
5
Add set_rng_method to filter, use this from pmcmc
#174 opened Jan 5, 2022 by richfitz
particle_filter$state should get option to return single trajectory
#173 opened Jan 5, 2022 by richfitz
Particle filter caries index that has too much information
#172 opened Jan 5, 2022 by richfitz
consider using posterior for handling samples
#146 opened Sep 27, 2021 by richfitz
Allow gpu models to be used easily
#135 opened Jun 21, 2021 by richfitz CRAN release (v1.0.x)
Harmonise sir example setup
#134 opened May 18, 2021 by richfitz CRAN release (v1.0.x)
Epic: CUDA/GPU wishlist (inference methods)
#122 opened Mar 2, 2021 by johnlees
3 tasks
compute evidence in smc2
#113 opened Feb 22, 2021 by richfitz
1
interface to restart smc2
#112 opened Feb 22, 2021 by richfitz
Deal with zero probabilities
#75 opened Sep 14, 2020 by johnlees CRAN release (v1.0.x)
Collect up to first state, efficiently
#66 opened Aug 21, 2020 by richfitz CRAN release (v1.0.x)
1
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