IGO Run QC

Application that displays all post sequencing stats for IGO to make pass/fail/deliver decisions for samples and projects.

Development Setup

Frontend

1. Setup

   cd frontend
   npm install
   npm run start           # application should be started on localhost:3000
   

2. Cookie - Place cookie in session w/ localhost as domain

   • Log into https://igodev.mskcc.org/login/
   • Upon successful authentication, change Domain of cookie from igodev.mskcc.org to localhost. This makes the cookie available in your local application. See image and guide below for more information about changing your cookie. NOTE - If the .env JWT_SECRET doesn't match that of igo-dev, the cookie will be invalid)
   • Navigate back to localhost:3000, which should now have the session cookie to make requests

In Chrome:

DevTools > Application > Storage:Cookies > Select Domain > Modify domain value of cookie w/ jic to localhost). Reference - View, Edit, And Delete Cookies With Chrome DevTools

Backend

1. Configurations - Update .env file

2. Run

cd backend
npm install
npm run start