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- basecalling_models Public
Benchmarked base calling models for nanopore sequencing providing super high accuracy and improved RNA modification detection
- mpileup2stats Public
From samtools mpileup to stats of coverage, ref_nuc, mismatches, deletions, insertions, RT-stops
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- DRS_CHIKV_Analysis Public
Direct RNA sequencing (DRS) analysis included in article: N6-methyladenosine modification is not a general trait of viral RNA genomes
- m6ABasecaller Public
An m6A-aware basecalling model to detect m6A modifications at single nucleotide resolution in individual reads (Cruciani, Delgado-Tejedor, Pryszcz et al., BioRxiv 2023)
- Nano-tRNAseq Public
Quantitative analysis of native tRNA populations using direct RNA nanopore sequencing (Lucas*, Pryszcz* et al., Nat Biotech 2023)
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