oncokb-variant-recommendation

Running Locally

1. First Time Setup

   1. Create a python virtual environment the .venv folder for python to use

      python3 -m venv .venv

   2. Create a .env

      cp env.example .env

2. Activating Virtual Environment

   1. Make python download and use open source code inside your .venv folder

      source .venv/bin/activate

   2. Check if python using .venv folder

      which python3

3. Install the latest packages for the project

   pip install -r requirements.txt

Running Tests

pytest

• Note that all test files must end in _test.py

Create/Update requirements file

pip freeze > requirements.txt