Hello World! example for looper

This repository provides minimal working examples for the looper pipeline submission engine.

This repository contains examples

1. /basic - A basic example pipeline and project.
2. /pephub - Example of how to point looper to PEPhub.
3. /pipestat - Example of a pipeline that uses pipestat for recording results.
4. /csv - How to use a pipeline with a CSV sample table (no YAML config)

Each example contains:

1. A looper config file (.looper.yaml).
2. Sample data plus metadata in PEP format (or pointer to PEPhub).
3. A looper-compatible pipeline.

Explanation and results of running the above examples can be found at Looper: Hello World