singularity-bwa

Singularity recipe for bwa.

Installing the container on Bridges 2

Copy the

• SIF file
• and the bwa script

to /opt/packages/bwa/0.7.3a.

Copy the file modulefile.lua to /opt/modulefiles/bwa as 0.7.3a.lua.

Building the image using the recipe

To build the image locally

Run the script build.sh to build image locally.

bash ./build.sh

To build the image remotely

Run the script rbuild.sh to build image remotely.

bash ./rbuild.sh

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The Biomedical Applications Group at the Pittsburgh Supercomputing Center in the Mellon College of Science at Carnegie Mellon University.