Issues: quinlan-lab/STRling
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Comparing STR length from STRling, which value would be appropriate to use?
#121
opened Feb 21, 2024 by
chanhee22kim
strling-outliers.py: Incompatibility with newer Pandas version
#119
opened Feb 13, 2024 by
ryanmcggg
Typo in command line help
documentation
Improvements or additions to documentation
good first issue
Good for newcomers
lower priority
#118
opened Dec 8, 2023 by
hdashnow
Exclude NaN rows in STRs.tsv output
good first issue
Good for newcomers
#105
opened Apr 20, 2022 by
hdashnow
Inconsistent soft-clipped reads may impact length estimates
wontfix
This will not be worked on
#93
opened Mar 24, 2021 by
hdashnow
Full diploid genotypes for 2 short alleles
enhancement
New feature or request
#91
opened Mar 17, 2021 by
seboyden
Support hemizygous calls in males on sex chromosomes
enhancement
New feature or request
#62
opened May 14, 2020 by
hdashnow
Need a more useful error for when bed file chromosomes don't match reference genome
#54
opened Mar 31, 2020 by
hdashnow
Do some sensible filtering by default
enhancement
New feature or request
#52
opened Mar 6, 2020 by
hdashnow
STRling version number is in two places
wontfix
This will not be worked on
#34
opened Dec 9, 2019 by
hdashnow
Evaluate bounds soft-clip support using entropy
enhancement
New feature or request
lower priority
#12
opened Oct 22, 2019 by
hdashnow
For cases where we are uncertain about the bounds, look at the reference genome sequence
#4
opened Jul 18, 2019 by
hdashnow
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