Support for new OME-Codecs options: jpegquality and disableChromaSubsampling

[iwbh15]

The ome-codecs-1.0.0 (used in QuPath 0.5.0) supports adjustable jpegquality.
In ome-codecs-1.0.1 the chroma subsampling can be activated/deactivated.

To support these options in QuPath, some changes must be made in QuPath.

Here is a description of the changes required:

• The parameters jpegquality and disableChromaSubsampling are set in a CodecOptions object.
• This CodecOptions object is used by the TiffWriter (e.g. in the writeImage() function in the OMEPyramidWriter).
  It must be 'activated' by calling tiffWriter.setCodecOptions(options);
• In QuPath, a possibility must be created to pass this CodecOptions object to the OMEPyramidWriter and finally to the writeImage() function.

Here is a script that shows how the basic call could look like:

import qupath.lib.images.writers.ome.OMEPyramidWriter
import ome.codecs.CodecOptions

// *** THIS IS NEW ***
CodecOptions options = new CodecOptions()
options.quality = 0.95


def imageData = getCurrentViewer().getImageData()
def server = imageData.getServer()
def name = getProjectEntry().getImageName()

def pathOutput = "E:\\tmp\\" + name + ".ome.tif"

def writer = new OMEPyramidWriter.Builder(server)

   // THIS IS THE MISSING LINK !
   .setCodecOptions(options)
   
   .compression(OMEPyramidWriter.CompressionType.JPEG)
   .tileSize(512)
   .scaledDownsampling(30, 2)
   .build()
   .writePyramid(pathOutput)

println 'Done'

Here are links to the PRs:
ome/ome-codecs#26
ome/ome-codecs#29

Is it useful and feasible to support these two options in QuPath?