Fix check action

.github/workflows/R-CMD-check.yaml

@@ -1,86 +1,29 @@
-# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
-# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 on:
   push:
-    branches:
-      - main
-      - master
+    branches: [main, master]
   pull_request:
-    branches:
-      - main
-      - master
+    branches: [main, master]
 
 name: R-CMD-check
 
 jobs:
   R-CMD-check:
-    runs-on: ${{ matrix.config.os }}
-
-    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
-
-    strategy:
-      fail-fast: false
-      matrix:
-        config:
-          - {os: windows-latest, r: 'release'}
-          - {os: macOS-latest, r: 'release'}
-          - {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
-          - {os: ubuntu-20.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
-
+    runs-on: ubuntu-latest
     env:
-      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
-      RSPM: ${{ matrix.config.rspm }}
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
-
+      R_KEEP_PKG_SOURCE: yes
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
-      - uses: r-lib/actions/setup-r@v1
+      - uses: r-lib/actions/setup-r@v2
         with:
-          r-version: ${{ matrix.config.r }}
-
-      - uses: r-lib/actions/setup-pandoc@v1
+          use-public-rspm: true
 
-      - name: Query dependencies
-        run: |
-          install.packages('remotes')
-          saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
-          writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
-        shell: Rscript {0}
-
-      - name: Cache R packages
-        if: runner.os != 'Windows'
-        uses: actions/cache@v2
+      - uses: r-lib/actions/setup-r-dependencies@v2
         with:
-          path: ${{ env.R_LIBS_USER }}
-          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
-          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
-
-      - name: Install system dependencies
-        if: runner.os == 'Linux'
-        run: |
-          while read -r cmd
-          do
-            eval sudo $cmd
-          done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')
-
-      - name: Install dependencies
-        run: |
-          remotes::install_deps(dependencies = TRUE)
-          remotes::install_cran("rcmdcheck")
-        shell: Rscript {0}
+          extra-packages: any::rcmdcheck
+          needs: check
 
-      - name: Check
-        env:
-          _R_CHECK_CRAN_INCOMING_REMOTE_: false
-        run: |
-          options(crayon.enabled = TRUE)
-          rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
-        shell: Rscript {0}
-
-      - name: Upload check results
-        if: failure()
-        uses: actions/upload-artifact@main
-        with:
-          name: ${{ runner.os }}-r${{ matrix.config.r }}-results
-          path: check
+      - uses: r-lib/actions/check-r-package@v2

README.Rmd

@@ -20,8 +20,8 @@ library(magrittr)
 # parsermd
 
 <!-- badges: start -->
-[![R-CMD-check](https://github.com/rundel/parsermd/workflows/R-CMD-check/badge.svg)](https://github.com/rundel/parsermd/actions)
 [![CRAN status](https://www.r-pkg.org/badges/version/parsermd)](https://CRAN.R-project.org/package=parsermd)
+[![R-CMD-check](https://github.com/rundel/parsermd/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/rundel/parsermd/actions/workflows/R-CMD-check.yaml)
 <!-- badges: end -->
 
 The goal of parsermd is to extract the content of an R Markdown file to allow for programmatic interactions with the document's contents (i.e. code chunks and markdown text). The goal is to capture the fundamental structure of the document and as such we do not attempt to parse every detail of the Rmd. Specifically, the yaml front matter, markdown text, and R code are read as text lines allowing them to be processed using other tools.

README.md

@@ -5,9 +5,9 @@
 
 <!-- badges: start -->
 
-[![R-CMD-check](https://github.com/rundel/parsermd/workflows/R-CMD-check/badge.svg)](https://github.com/rundel/parsermd/actions)
 [![CRAN
 status](https://www.r-pkg.org/badges/version/parsermd)](https://CRAN.R-project.org/package=parsermd)
+[![R-CMD-check](https://github.com/rundel/parsermd/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/rundel/parsermd/actions/workflows/R-CMD-check.yaml)
 <!-- badges: end -->
 
 The goal of parsermd is to extract the content of an R Markdown file to
@@ -52,35 +52,35 @@ any of the topic specific articles.
 #>     ├── Heading [h2] - R Markdown
 #>     │   ├── Markdown [6 lines]
 #>     │   ├── Chunk [r, 1 lines] - cars
-#>     │   └── Chunk [r, 1 lines] - <unnamed>
+#>     │   └── Chunk [r, 1 lines] - unnamed-chunk-1
 #>     └── Heading [h2] - Including Plots
 #>         ├── Markdown [2 lines]
 #>         ├── Chunk [r, 1 opt, 1 lines] - pressure
 #>         └── Markdown [2 lines]
 
 as_tibble(rmd)
-#> # A tibble: 12 x 5
-#>    sec_h1  sec_h2          type          label      ast           
-#>    <chr>   <chr>           <chr>         <chr>      <rmd_ast>     
-#>  1 <NA>    <NA>            rmd_yaml_list  <NA>      <yaml>        
-#>  2 Setup   <NA>            rmd_heading    <NA>      <heading [h1]>
-#>  3 Setup   <NA>            rmd_chunk     "setup"    <chunk [r]>   
-#>  4 Content <NA>            rmd_heading    <NA>      <heading [h1]>
-#>  5 Content R Markdown      rmd_heading    <NA>      <heading [h2]>
-#>  6 Content R Markdown      rmd_markdown   <NA>      <rmd_mrkd [6]>
-#>  7 Content R Markdown      rmd_chunk     "cars"     <chunk [r]>   
-#>  8 Content R Markdown      rmd_chunk     ""         <chunk [r]>   
-#>  9 Content Including Plots rmd_heading    <NA>      <heading [h2]>
-#> 10 Content Including Plots rmd_markdown   <NA>      <rmd_mrkd [2]>
-#> 11 Content Including Plots rmd_chunk     "pressure" <chunk [r]>   
-#> 12 Content Including Plots rmd_markdown   <NA>      <rmd_mrkd [2]>
+#> # A tibble: 12 × 5
+#>    sec_h1  sec_h2          type          label           ast           
+#>    <chr>   <chr>           <chr>         <chr>           <rmd_ast>     
+#>  1 <NA>    <NA>            rmd_yaml_list <NA>            <yaml>        
+#>  2 Setup   <NA>            rmd_heading   <NA>            <heading [h1]>
+#>  3 Setup   <NA>            rmd_chunk     setup           <chunk [r]>   
+#>  4 Content <NA>            rmd_heading   <NA>            <heading [h1]>
+#>  5 Content R Markdown      rmd_heading   <NA>            <heading [h2]>
+#>  6 Content R Markdown      rmd_markdown  <NA>            <rmd_mrkd [6]>
+#>  7 Content R Markdown      rmd_chunk     cars            <chunk [r]>   
+#>  8 Content R Markdown      rmd_chunk     unnamed-chunk-1 <chunk [r]>   
+#>  9 Content Including Plots rmd_heading   <NA>            <heading [h2]>
+#> 10 Content Including Plots rmd_markdown  <NA>            <rmd_mrkd [2]>
+#> 11 Content Including Plots rmd_chunk     pressure        <chunk [r]>   
+#> 12 Content Including Plots rmd_markdown  <NA>            <rmd_mrkd [2]>
 
 rmd_select(rmd, by_section("Content"))
 #> └── Heading [h1] - Content
 #>     ├── Heading [h2] - R Markdown
 #>     │   ├── Markdown [6 lines]
 #>     │   ├── Chunk [r, 1 lines] - cars
-#>     │   └── Chunk [r, 1 lines] - <unnamed>
+#>     │   └── Chunk [r, 1 lines] - unnamed-chunk-1
 #>     └── Heading [h2] - Including Plots
 #>         ├── Markdown [2 lines]
 #>         ├── Chunk [r, 1 opt, 1 lines] - pressure
@@ -91,7 +91,7 @@ rmd_select(rmd, by_section(c("Content", "*"))) %>%
 #> └── Heading [h1] - Content
 #>     ├── Heading [h2] - R Markdown
 #>     │   ├── Chunk [r, 1 lines] - cars
-#>     │   └── Chunk [r, 1 lines] - <unnamed>
+#>     │   └── Chunk [r, 1 lines] - unnamed-chunk-1
 #>     └── Heading [h2] - Including Plots
 #>         └── Chunk [r, 1 opt, 1 lines] - pressure