Github: http://github.com/sifrimlab/pyxelperfect
Author: david.wouters@kuleuven.be
This repository represents a collection of useful functions that are used in all bioinformatic image processing performed by the sifrimlab. It's divided into different modules each with their own theme, and each modules hosts several standalone functions that can be useful in any application.
This python package is available from pypi:
pip install pyxelperfectFor tensorflow powered functionality (e.g.: Stardist and cellpose segmentation) install additional requirements:
pip install pyxelperfect[tensor]Under construction
If you use this repository or any of its modules for your analysis, please cite this github:
@misc{wouters,
title={Sifrimlab/pyxelperfect: Collection of image-processing tools for bioinformatic applications},
url={https://github.com/sifrimlab/pyxelperfect},
journal={GitHub},
author={Wouters, David}}